Repositories list

• dipy.org

  Public
  The DIPY Website

  Python

  •8•2•3•0•Updated Dec 23, 2024Dec 23, 2024

• dipy

  Public
  DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

  pythontrackingmachine-learning+ 17medical-imagingregistrationneuroimagingsegmentationbundlesspherical-harmonicsmicrostructure+ 10

  Python

  •

  Other

  •442•725•133•36•Updated Dec 22, 2024Dec 22, 2024

• preview-html

  Public
  Preview documentation changes from Pull Request

  HTML

  •0•0•0•0•Updated Dec 20, 2024Dec 20, 2024

• dipy_data

  Public
  Small datasets, figures and gifs used in tutorials

  6•2•0•9•Updated Dec 20, 2024Dec 20, 2024

• dipy_web

  Public
  Website generation and content management tools for dipy.org

  HTML

  •15•4•11•0•Updated Dec 18, 2024Dec 18, 2024

• docs.dipy.org

  Public
  DIPY documentation generated html

  apimrimedical-imaging+ 1diffusion-mri

  HTML

  •0•0•0•0•Updated Dec 14, 2024Dec 14, 2024

• GPUStreamlines

  Public
  Cuda

  •

  BSD 3-Clause "New" or "Revised" License

  •6•9•2•6•Updated Dec 9, 2024Dec 9, 2024

• workshop.dipy.org

  Public
  The DIPY Workshop website

  1•0•0•0•Updated Oct 24, 2024Oct 24, 2024

• polaffini

  Public
  0•0•0•0•Updated Feb 6, 2024Feb 6, 2024

• miccai23

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated Aug 24, 2023Aug 24, 2023

• dipy_datatest

  Public
  Store files use for unittest

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Apr 22, 2023Apr 22, 2023

• dipy_assets

  Public
  Primary for sharing PDFs, other public documents and media.

  0•1•0•0•Updated Mar 6, 2023Mar 6, 2023

• parallel_experiments

  Public
  Python

  •2•0•0•0•Updated Dec 19, 2022Dec 19, 2022

• bl_apps_dipy_denoise_lpca

  Public
  Brainlife wrapper app for dipy_denoise_lpca workflows.

  diffusion-mridiffusion-preprocessingdiffusion-denoising+ 1dipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•1•0•Updated Jun 11, 2021Jun 11, 2021

• bl_apps_dipy_recobundles

  Public
  Brainlife wrapper app for dipy_recobundles workflows.

  segmentationdiffusion-mridipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•1•0•Updated Jun 11, 2021Jun 11, 2021

• dipy-dki-paper

  Public
  Jupyter Notebook

  •1•2•0•0•Updated Jun 1, 2021Jun 1, 2021

• cudipy

  Public
  cupy-accelerated DIPY

  Python

  •

  Other

  •5•10•5•1•Updated Mar 16, 2021Mar 16, 2021

• cookiecutter-bl-dipy-apps

  Public
  Cookiecutter to generate brainlife apps for dipy

  Python

  •

  MIT License

  •0•0•0•0•Updated Dec 16, 2020Dec 16, 2020

• bl_apps_dipy_buan_shapes

  Public
  BUAN shape analysis App in BrainLife

  analysisdiffusion-mridipy+ 1tractometry

  Dockerfile

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•0•0•Updated Dec 15, 2020Dec 15, 2020

• bl_apps_dipy_buan_profiles

  Public
  BUAN bundle profiles

  Dockerfile

  •

  BSD 3-Clause "New" or "Revised" License

  •1•1•0•0•Updated Dec 15, 2020Dec 15, 2020

• bl_apps_dipy_info

  Public
  Brainlife wrapper app for dipy_info workflows.

  diffusion-mridipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Dec 15, 2020Dec 15, 2020

• bl_apps_dipy_median_otsu

  Public
  Brainlife wrapper app for dipy_median_otsu workflows.

  diffusion-mridipydiffusion-preprocessing

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•1•0•Updated Dec 15, 2020Dec 15, 2020

• bl_apps_dipy_reslice

  Public
  Brainlife wrapper app for dipy_reslice workflows.

  diffusion-mridiffusion-preprocessingdipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Dec 15, 2020Dec 15, 2020

• bl_apps_dipy_track_pft

  Public
  Brainlife wrapper app for dipy_track_pft workflows.

  trackingdiffusion-mritractography+ 1dipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Dec 15, 2020Dec 15, 2020

• bl_apps_dipy_track

  Public
  Brainlife wrapper app for dipy_track workflows.

  trackingdiffusion-mritractography+ 1dipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•1•0•Updated Dec 15, 2020Dec 15, 2020

• bl_apps_dipy_slr

  Public
  Brainlife wrapper app for dipy_slr workflows.

  diffusion-mridipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•1•0•Updated Dec 11, 2020Dec 11, 2020

• bl_apps_dipy_mask

  Public template
  Brainlife wrapper app for dipy_mask workflows.

  Dockerfile

  •

  BSD 3-Clause "New" or "Revised" License

  •0•1•0•0•Updated Dec 11, 2020Dec 11, 2020

• bl_apps_dipy_gibbs_ringing

  Public
  Brainlife wrapper app for dipy_gibbs_ringing workflows.

  diffusion-mridiffusion-preprocessingdipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Dec 11, 2020Dec 11, 2020

• bl_apps_dipy_fit_mapmri

  Public
  Brainlife wrapper app for dipy_fit_mapmri workflows.

  diffusion-mridipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Dec 11, 2020Dec 11, 2020

• bl_apps_dipy_fit_ivim

  Public
  Brainlife wrapper app for dipy_fit_ivim workflows.

  diffusion-mridipy

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•1•0•Updated Dec 11, 2020Dec 11, 2020