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@chnops Kirsten Hofmockel Research

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    13 repositories

    • ITS_soil_landuse_aggregate

      Public
      Contains code for data analysis of Bach et al. (in submission), Grassland plant communities and nitrogen fertilization affect soil fungal communities at micro- and macroscale
      R
      •3•2•0•0•Updated Jan 16, 2017Jan 16, 2017

    • Protocols

      Public
      Shell
      •
      MIT License
      •2•0•0•0•Updated Nov 6, 2015Nov 6, 2015

    • code

      Public
      useful scripts
      Python
      •
      MIT License
      •1•0•0•0•Updated Sep 22, 2015Sep 22, 2015

    • Landscape_Biomass_16S

      Public
      R
      •0•0•0•0•Updated Mar 20, 2015Mar 20, 2015

    • ebach_collab

      Public
      R
      •1•0•0•0•Updated Feb 10, 2015Feb 10, 2015

    • carbon-core-soil-paper

      Public
      Data & scripts used to reproduce carbon core metagenome (Howe et al, in prep).
      R
      •
      MIT License
      •1•0•0•0•Updated Nov 19, 2014Nov 19, 2014

    • R_enzyme_scripts

      Public
      These are scripts that assist with the processing of extracellular enzyme data
      R
      •
      GNU General Public License v2.0
      •2•0•0•0•Updated Oct 31, 2014Oct 31, 2014

    • bayezymes

      Public
      Scripts related to Bayesian networks used for mining soil metagenomes
      R
      •
      GNU General Public License v2.0
      •1•0•0•0•Updated Sep 30, 2014Sep 30, 2014

    • bayes_ghg_flux

      Public
      This is a repo for work on the bayesian ghg flux model
      R
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Aug 14, 2014Aug 14, 2014

    • QIIMEIntegration

      Public
      I'm working on incorporating QIIME into a workspace-specific pipeline. I keep notes and useful scripts here.
      PHP
      •
      GNU General Public License v3.0
      •3•2•0•0•Updated Aug 13, 2014Aug 13, 2014

    • TempleTexas

      Public
      Statistic analysis for a site in Texas
      R
      •1•0•0•0•Updated Aug 13, 2014Aug 13, 2014

    • co-occurrence

      Public
      R scripts for performing co-occurrence analyses
      R
      •
      GNU General Public License v2.0
      •64•4•2•0•Updated Aug 5, 2014Aug 5, 2014

    • readme

      Public
      Best practice documentation for creating and managing repositories in the chnops organization
      GNU General Public License v2.0
      •0•1•0•0•Updated Jul 22, 2014Jul 22, 2014