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- Bioinformatics Technology Lab common code library
- Linear-time de novo Long Read Assembler
- Integrated Pipeline Reports (IPR) API, the reporting API as part of the PORI platform
ntStat
Public- ⛏ HLA predictions from NGS shotgun data
- Integrated Pipeline Reports (IPR) client. The web interface for the reporting application as part of PORI
- 🌳 Human ancestry inference from genomic data
- Front-end web client for the GraphKB project
ntEdit
Public✏️ Genome assembly polishing & SNV detection- Tandem repeat expansion detection or genotyping from long-read alignments
- 🌈Scaffold genome sequence assemblies using linked or long read sequencing data
- Nanopore sequence read simulator
- 🔬 Assemble large genomes using short reads
- Minimizer-based assembly scaffolding and mapping using long reads