Worcester Image Data Management
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17 repositories
W-IDM_OmeroImporterPy
PublicThis repository contains software that was developed to add metadata annotations to bioimage data before importing it into OMEROMicroMetaApp-React
PublicThis is the React implementation of Micro-Meta App, Microscopy Metadata for the real world!- This repository contains Python software that was created to explore file system directories and automatically collect the names of image data files to be annotated with experimental and sample preparation metadata and imported into OMERO.
MicroMetaApp-Electron
PublicElectron wrapped, stand-alone version of Micro-Meta App, microscopy metadata for the real world!MicroMetaApp-Omero
PublicThis is a limited-functionality, beta - implementation of the integration of Micro-Meta App in the OMERO.web clientMicroMetaExplorer
PublicOmeroImporterPy-docs
PublicW-IDM_OmeroImporter
PublicThis repository contains software that was developed for the management of bioimage data generated at UMass Chan Medical School and as part of the Canada Bioimaging RDM initiative.NBO-Q_MicroscopyGlossary
Public4DN-BINA-OME-QUAREP Microscopy Glossary- The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration with the BINA Data Management and Quality Control Working Group (https://www.bioimagingna.org/qc-dm-wg) for documenting microscopy experiments and assessing the quality of image data.
- This is a converter written in Java that translates an XSD microscopy metadata schema into JSON
W-IDM_OmeroDataWriter
PublicThis repository contains sofware that was created for the automatic image data management of image data generated at UMass Chan Medical School and as part of the Canada Bioimaging RDM initiative.MicroMetaApp.github.io
PublicMicroMetaApp-docs
Public