Lattice Automation

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10 repositories

seqviz
Public
a JavaScript DNA, RNA, and protein sequence viewer
biology synthetic-biology vector dna protein rna igem plasmid
TypeScript
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MIT License
•54•251•11•15•Updated Dec 26, 2024Dec 26, 2024
seqfold
Public
nucleic acid folding
dna rna folding rna-structure-prediction structure-prediction rna-folding dna-structure-prediction dna-folding
Python
•
MIT License
•12•86•4•0•Updated Aug 3, 2024Aug 3, 2024
seqviz-workflows
Public
a JavaScript DNA, RNA, and protein sequence viewer
TypeScript
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MIT License
•54•0•0•0•Updated Jul 29, 2024Jul 29, 2024
seqparse
Public
Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format
javascript parse parsing file genbank fasta igem ncbi
TypeScript
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MIT License
•4•11•5•1•Updated Apr 30, 2024Apr 30, 2024
primers
Public
A PCR primer tool for DNA assembly flows
dna pcr dna-assembly primers gibson-assembly golden-gate-cloning
Python
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MIT License
•6•29•1•0•Updated Apr 24, 2024Apr 24, 2024
synbio
Public
a DNA assembly library
annotation robotics protocols dna-assembly picklist plasmids seqrecord
Python
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MIT License
•2•18•4•1•Updated Dec 15, 2023Dec 15, 2023
icor-codon-optimization
Public
RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8
codon-optimization codon benchmark deep-learning
Python
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MIT License
•13•62•1•0•Updated Apr 10, 2023Apr 10, 2023
repp
Public
repository-based plasmid design
bioinformatics assembly dna blast repositories plasmid gibson
Go
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GNU General Public License v2.0
•4•28•2•0•Updated Nov 28, 2022Nov 28, 2022
constellation-js
Public
Library for combinatorially specifying, constraining, and exploring genetic design spaces.
JavaScript
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MIT License
•8•1•0•0•Updated Aug 29, 2019Aug 29, 2019
aws-codepipeline-jenkins-aws-codedeploy_linux
Public archive
Use this sample when creating a four-stage pipeline in AWS CodePipeline while following the Four Stage Pipeline Tutorial. http://docs.aws.amazon.com/codepipeline/latest/userguide/getting-started-4.html
Ruby
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Apache License 2.0
•1.4k•0•0•0•Updated Oct 30, 2015Oct 30, 2015