Repositories list

• Mini2p

  Public
  PowerShell

  •0•0•0•0•Updated Sep 5, 2023Sep 5, 2023

• LocomotionControl

  Public
  Jupyter Notebook

  •

  MIT License

  •0•3•0•0•Updated May 4, 2023May 4, 2023

• vgatPAG

  Public
  Jupyter Notebook

  •0•1•0•0•Updated Sep 29, 2022Sep 29, 2022

• Kino

  Public
  2D animal locomotion kinematics

  Python

  •

  MIT License

  •0•1•0•0•Updated Dec 9, 2021Dec 9, 2021

• imgreg2D

  Public
  2D image registration in python, using napari.

  image-processingaffineimage-registration+ 2napari2d-image

  Python

  •

  MIT License

  •3•15•0•2•Updated Dec 7, 2021Dec 7, 2021

• Common-Coordinate-Behaviour

  Public
  Behavioural arena alignment and fisheye correction

  Python

  •

  MIT License

  •1•3•1•0•Updated May 8, 2021May 8, 2021

• escape-analysis

  Public
  analysis of escape trajectories

  Python

  •

  MIT License

  •0•2•0•0•Updated May 8, 2021May 8, 2021

• Behaviour

  Public
  Collection of shared utilities to process and analyse behaviour data

  Python

  •0•4•0•0•Updated Dec 8, 2020Dec 8, 2020

• Fiberphotometry

  Public
  Python

  •0•2•1•0•Updated Oct 28, 2020Oct 28, 2020

• escape-visualization

  Public
  DLC tracking, video registration, escape video rendering

  Python

  •

  MIT License

  •0•4•0•0•Updated Sep 14, 2020Sep 14, 2020

• FC_analysis

  Public
  Fede's analysis code, all things tracking, plotting and modelling

  Python

  •1•0•0•0•Updated Aug 24, 2020Aug 24, 2020

• tdmstovideo_converter

  Public
  Python

  •1•0•1•1•Updated Feb 10, 2020Feb 10, 2020

• injectionsitefinder

  Public
  Python

  •0•1•0•0•Updated Feb 3, 2020Feb 3, 2020

• VisualStimuli

  Public
  Testing python psychopy to generate visual stimuli (e.g. gratings, looms, flashes..)

  Python

  •0•3•0•0•Updated Nov 13, 2019Nov 13, 2019

• Mantis_PythonComms

  Public
  Code for Mantis and Python to talk to each other

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Sep 3, 2018Sep 3, 2018