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    14 repositories

    • NanoAssem-flow

      Public
      Pipeline for QC and assembly of ONT reads
      Nextflow
      •
      Apache License 2.0
      •0•0•1•0•Updated Mar 20, 2025Mar 20, 2025

    • shiny-template

      Public
      R
      •1•0•0•0•Updated Mar 17, 2025Mar 17, 2025

    • AAGIQuarto

      Public
      A Quarto Extension for AAGI Themed Products, e.g., PDF, Word, revealjs, and PPT for AAGI staff
      literate-programmingquartoquarto-extension
      TeX
      •
      MIT License
      •2•4•2•0•Updated Mar 7, 2025Mar 7, 2025

    • AAGIThemes

      Public
      AAGI Branding for R Graphical and Tabular Outputs
      R
      •
      GNU General Public License v3.0
      •1•2•4•0•Updated Mar 6, 2025Mar 6, 2025

    • nert

      Public
      An API Client for TERN Data Resources
      R
      •
      Other
      •0•2•0•0•Updated Mar 6, 2025Mar 6, 2025

    • AAGIPalettes

      Public
      AAGI Colours and Colour Palettes for R
      R
      •
      Other
      •0•4•0•0•Updated Mar 6, 2025Mar 6, 2025

    • qcflow-rnaseq

      Public
      ✅ 🚨 QC and alignement pipeline for RNA-seq reads
      Nextflow
      •
      Apache License 2.0
      •0•1•1•0•Updated Feb 16, 2025Feb 16, 2025

    • InPlotSampling

      Public
      A package for ranked set sampling and statistical inference
      R
      •
      Other
      •0•5•0•0•Updated Feb 14, 2025Feb 14, 2025

    • PacB-flow

      Public
      🌊 🔗 PacBio long reads assebly workflow based on Nextflow
      Nextflow
      •
      Apache License 2.0
      •0•1•0•0•Updated Jan 20, 2025Jan 20, 2025

    • AAGITemplates

      Public
      Rmarkdown, LaTeX, and Knitr reporting templates for AAGI staff.
      TeX
      •
      MIT License
      •4•8•10•1•Updated Jan 14, 2025Jan 14, 2025

    • EnvirData_tools_list

      Public
      A simple repo sharing a list of environmental data (e.g. climate and soils) acquisition tools
      0•3•0•0•Updated Nov 21, 2024Nov 21, 2024

    • Trial_Protocol_Best_Practices

      Public
      A basic introduction to trial protocols and data collection for industry partners
      CSS
      •
      Creative Commons Zero v1.0 Universal
      •0•2•0•0•Updated Nov 6, 2024Nov 6, 2024

    • Intro_to_Trial_Design

      Public
      A basic introduction to trial design for industry partners
      statisticsstatistics-coursestatistics-learningagricultural-researchtrial-design
      CSS
      •
      Creative Commons Zero v1.0 Universal
      •0•2•0•0•Updated Oct 28, 2024Oct 28, 2024

    • .github

      Public
      0•0•0•0•Updated Aug 31, 2024Aug 31, 2024