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41 Open 256 Closed
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Issues list

Create JupyterLab based version of Dockerfile
#347 opened May 22, 2024 by pgleeson Release 0.9.5 of OpenWorm Stack
1
Possible memory leak - openworm 0.9.4
#341 opened Feb 4, 2024 by NuSynth
1
The first time running version 0.9.3 of this project failed.
#336 opened Nov 15, 2023 by YmShan
6
Output fails when running with duration higher than 2000
#332 opened Apr 25, 2023 by LucianSheen
5 tasks
7
Corrupted video and data.
#330 opened Nov 16, 2022 by Undertone0809
3
Configuration file failed with Version 0.9.3
#329 opened Oct 24, 2022 by Enderest
6
Docker GPU support
#320 opened Mar 13, 2022 by clausagerskov Release 0.9.5 of OpenWorm Stack
2
Pin versions in Dockerfile for releases
#317 opened Oct 12, 2021 by mwatts15
1
Use a more efficient means for recording Sibernetic simulation video
#315 opened Sep 11, 2021 by mwatts15
Use virtualenv for Docker Python packages
#314 opened Sep 7, 2021 by mwatts15
@mwatts15
Create GSuite and GitHub account for automation
#309 opened Mar 29, 2021 by mwatts15
1
The openworm.org SSL certificate is valid for github.com, *.github.com, but not openworm.org. browser.openworm.org sends an empty reply over HTTPS.
#305 opened Oct 17, 2020 by AlbinoDrought
5 tasks
2
Incorporate ChannelWorm2 into Docker
#288 opened Sep 2, 2018 by gsarma Release 0.9.6 of OpenWorm Stack
Incorporate MyBinder.org configurations into 0.9 and get stack running on MyBinder.org
#287 opened Aug 29, 2018 by slarson Release 0.9.6 of OpenWorm Stack
Incorporate a DevoWorm related code demo into the simulation stack
#284 opened May 11, 2018 by slarson Release 0.9.5 of OpenWorm Stack
@portegys @balicea
1
Typical delta value in PCISPH
#279 opened Apr 4, 2018 by dineshadepu
Pre-compile the c302 simulation
#273 opened Feb 12, 2018 by slarson Release 0.9.5 of OpenWorm Stack
@slarson
Option to define which files to copy to the output directory
#270 opened Jan 7, 2018 by lungd Release 0.9.6 of OpenWorm Stack
Replace xvfb
#268 opened Jan 5, 2018 by lungd Release 0.9.6 of OpenWorm Stack
1
Plot connection matrix
#264 opened Jan 5, 2018 by lungd Release 0.9.5 of OpenWorm Stack
Enable GPU acceleration for Sibernetic running within stack
#262 opened Jan 5, 2018 by slarson Release 0.9.6 of OpenWorm Stack
2
Incorporate running c302 "unit tests" and "integration tests"
#259 opened Jan 5, 2018 by slarson Release 0.9.6 of OpenWorm Stack
Simplify movie output
#255 opened Jan 5, 2018 by slarson Release 0.9.5 of OpenWorm Stack
Determine Ion Channel Default Lists for Muscle Cells and Key Neurons
#245 opened Feb 14, 2017 by slarson
@cheelee @slarson
@pgleeson @a-palyanov @lungd @VahidGh @raminmh
1
Produce Channel D I/V curve comparison figure
#244 opened Feb 3, 2017 by slarson Produce a multi-panel figure representing the training and simulated data produced by the model
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