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openpipeline 0.2.0

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@rcannood rcannood released this 22 Jun 15:47
· 1978 commits to main since this release

Functionality

  • Added convert_10x_to_h5ad and download_10x_dataset components.

Minor changes

  • Workflow bd_rhapsody_wta: Minor change to workflow to allow for easy processing of multiple samples with a tsv.

  • Component bd_rhapsody_wta: Added more parameters, --parallel and --timestamps.

  • Added pbmc_1k_protein_v3 as a test resource.

  • Translate bd_rhapsody_extracth5ad from R into Python script.

  • bd_rhapsody_wta: Remove temporary directory after execution.