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openphacts · Nov 20, 2016 · 1f10605 · 1f10605
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diff --git a/docs/ActivitySearch.html b/docs/ActivitySearch.html
@@ -28,9 +28,7 @@ <h1 class="page-title">Class: ActivitySearch</h1>
 
 <header>
 
-        <h2>
-        ActivitySearch
-        </h2>
+        <h2>ActivitySearch</h2>
 
 
 </header>
@@ -250,13 +248,13 @@ <h5>Parameters:</h5>
 </div>
 
 <nav>
-    <h2><a href="index.html">Home</a></h2><h3>Classes</h3><ul><li><a href="ActivitySearch.html">ActivitySearch</a></li><li><a href="CompoundSearch.html">CompoundSearch</a></li><li><a href="ConceptWikiSearch.html">ConceptWikiSearch</a></li><li><a href="DataSources.html">DataSources</a></li><li><a href="DiseaseSearch.html">DiseaseSearch</a></li><li><a href="MapSearch.html">MapSearch</a></li><li><a href="PathwaySearch.html">PathwaySearch</a></li><li><a href="StructureSearch.html">StructureSearch</a></li><li><a href="TargetSearch.html">TargetSearch</a></li><li><a href="TissueSearch.html">TissueSearch</a></li><li><a href="TreeSearch.html">TreeSearch</a></li><li><a href="Version.html">Version</a></li></ul><h3>Namespaces</h3><ul><li><a href="Openphacts.html">Openphacts</a></li></ul><h3>Global</h3><ul><li><a href="global.html#arrayify">arrayify</a></li><li><a href="global.html#encodeParams">encodeParams</a></li></ul>
+    <h2><a href="index.html">Home</a></h2><h3>Classes</h3><ul><li><a href="ActivitySearch.html">ActivitySearch</a></li><li><a href="CompoundSearch.html">CompoundSearch</a></li><li><a href="ConceptWikiSearch.html">ConceptWikiSearch</a></li><li><a href="DataSources.html">DataSources</a></li><li><a href="DiseaseSearch.html">DiseaseSearch</a></li><li><a href="MapSearch.html">MapSearch</a></li><li><a href="PathwaySearch.html">PathwaySearch</a></li><li><a href="StructureSearch.html">StructureSearch</a></li><li><a href="TargetSearch.html">TargetSearch</a></li><li><a href="TissueSearch.html">TissueSearch</a></li><li><a href="TreeSearch.html">TreeSearch</a></li><li><a href="Version.html">Version</a></li></ul><h3>Namespaces</h3><ul><li><a href="Openphacts.html">Openphacts</a></li></ul><h3>Global</h3><ul><li><a href="global.html#arrayify">arrayify</a></li><li><a href="global.html#debug">debug</a></li><li><a href="global.html#encodeParams">encodeParams</a></li><li><a href="global.html#nets">nets</a></li></ul>
 </nav>
 
 <br class="clear">
 
 <footer>
-    Documentation generated by <a href="https://github.com/jsdoc3/jsdoc">JSDoc 3.3.2</a> on Wed Jul 22 2015 13:50:06 GMT+0100 (GMT Daylight Time)
+    Documentation generated by <a href="https://github.com/jsdoc3/jsdoc">JSDoc 3.4.3</a> on Sun Nov 20 2016 17:15:04 GMT+0100 (CET)
 </footer>
 
 <script> prettyPrint(); </script>

diff --git a/docs/ActivitySearch.js.html b/docs/ActivitySearch.js.html
@@ -55,7 +55,7 @@ <h1 class="page-title">Source: ActivitySearch.js</h1>
     pageSize ? params['_pageSize'] = pageSize : '';
     orderBy ? params['_orderBy'] = orderBy : '';
     lens ? params['_lens'] = lens : '';
-    nets({
+    Utils.nets({
         url: this.baseURL + '/pharmacology/filters/activities?' + Utils.encodeParams(params),
         method: "GET",
         // 30 second timeout just in case
@@ -81,7 +81,7 @@ <h1 class="page-title">Source: ActivitySearch.js</h1>
     lens ? params['_lens'] = lens : '';
     var unitsURL = null;
     activityType != null ? unitsURL = '/pharmacology/filters/units/' + activityType : unitsURL = '/pharmacology/filters/units';
-    nets({
+    Utils.nets({
         url: this.baseURL + unitsURL + '?' + Utils.encodeParams(params),
         method: "GET",
         // 30 second timeout just in case
@@ -108,7 +108,7 @@ <h1 class="page-title">Source: ActivitySearch.js</h1>
     page ? params['_page'] = page : '';
     pageSize ? params['_pageSize'] = pageSize : '';
     orderBy ? params['_orderBy'] = orderBy : '';
-    nets({
+    Utils.nets({
         url: this.baseURL + '/pharmacology/filters/units?' + Utils.encodeParams(params),
         method: "GET",
         // 30 second timeout just in case
@@ -161,13 +161,13 @@ <h1 class="page-title">Source: ActivitySearch.js</h1>
 </div>
 
 <nav>
-    <h2><a href="index.html">Home</a></h2><h3>Classes</h3><ul><li><a href="ActivitySearch.html">ActivitySearch</a></li><li><a href="CompoundSearch.html">CompoundSearch</a></li><li><a href="ConceptWikiSearch.html">ConceptWikiSearch</a></li><li><a href="DataSources.html">DataSources</a></li><li><a href="DiseaseSearch.html">DiseaseSearch</a></li><li><a href="MapSearch.html">MapSearch</a></li><li><a href="PathwaySearch.html">PathwaySearch</a></li><li><a href="StructureSearch.html">StructureSearch</a></li><li><a href="TargetSearch.html">TargetSearch</a></li><li><a href="TissueSearch.html">TissueSearch</a></li><li><a href="TreeSearch.html">TreeSearch</a></li><li><a href="Version.html">Version</a></li></ul><h3>Namespaces</h3><ul><li><a href="Openphacts.html">Openphacts</a></li></ul><h3>Global</h3><ul><li><a href="global.html#arrayify">arrayify</a></li><li><a href="global.html#encodeParams">encodeParams</a></li></ul>
+    <h2><a href="index.html">Home</a></h2><h3>Classes</h3><ul><li><a href="ActivitySearch.html">ActivitySearch</a></li><li><a href="CompoundSearch.html">CompoundSearch</a></li><li><a href="ConceptWikiSearch.html">ConceptWikiSearch</a></li><li><a href="DataSources.html">DataSources</a></li><li><a href="DiseaseSearch.html">DiseaseSearch</a></li><li><a href="MapSearch.html">MapSearch</a></li><li><a href="PathwaySearch.html">PathwaySearch</a></li><li><a href="StructureSearch.html">StructureSearch</a></li><li><a href="TargetSearch.html">TargetSearch</a></li><li><a href="TissueSearch.html">TissueSearch</a></li><li><a href="TreeSearch.html">TreeSearch</a></li><li><a href="Version.html">Version</a></li></ul><h3>Namespaces</h3><ul><li><a href="Openphacts.html">Openphacts</a></li></ul><h3>Global</h3><ul><li><a href="global.html#arrayify">arrayify</a></li><li><a href="global.html#debug">debug</a></li><li><a href="global.html#encodeParams">encodeParams</a></li><li><a href="global.html#nets">nets</a></li></ul>
 </nav>
 
 <br class="clear">
 
 <footer>
-    Documentation generated by <a href="https://github.com/jsdoc3/jsdoc">JSDoc 3.3.2</a> on Wed Jul 22 2015 13:50:06 GMT+0100 (GMT Daylight Time)
+    Documentation generated by <a href="https://github.com/jsdoc3/jsdoc">JSDoc 3.4.3</a> on Sun Nov 20 2016 17:15:04 GMT+0100 (CET)
 </footer>
 
 <script> prettyPrint(); </script>

diff --git a/docs/CompoundSearch.html b/docs/CompoundSearch.html
@@ -28,9 +28,7 @@ <h1 class="page-title">Class: CompoundSearch</h1>
 
 <header>
 
-        <h2>
-        CompoundSearch
-        </h2>
+        <h2>CompoundSearch</h2>
 
 
 </header>
@@ -750,7 +748,11 @@ <h5>Parameters:</h5>
 
     <h5>Example</h5>
 
-    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/1.5", "appID", "appKey");var callback=function(success, status, response){    var classMembersResult == searcher.parseCompoundClassMembersResponse(response);};searcher.compoundClassMembers('http://purl.obolibrary.org/obo/CHEBI_24431', 1, 20, null, null, callback);</code></pre>
+    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/2.1", "appID", "appKey");
+var callback=function(success, status, response){
+    var classMembersResult == searcher.parseCompoundClassMembersResponse(response);
+};
+searcher.compoundClassMembers('http://purl.obolibrary.org/obo/CHEBI_24431', 1, 20, null, null, callback);</code></pre>
 
 
 
@@ -960,7 +962,11 @@ <h5>Parameters:</h5>
 
     <h5>Example</h5>
 
-    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/1.5", "appID", "appKey");var callback=function(success, status, response){   var result = searcher.parseCompoundClassMembersCountResponse(response);};searcher.compoundClassMembersCount('http://purl.obolibrary.org/obo/CHEBI_24431', null, callback);</code></pre>
+    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/2.1", "appID", "appKey");
+var callback=function(success, status, response){
+   var result = searcher.parseCompoundClassMembersCountResponse(response);
+};
+searcher.compoundClassMembersCount('http://purl.obolibrary.org/obo/CHEBI_24431', null, callback);</code></pre>
 
 
 
@@ -1891,7 +1897,11 @@ <h5>Parameters:</h5>
 
     <h5>Example</h5>
 
-    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/1.5", "appID", "appKey");var callback=function(success, status, response){    var pharmacologyResult == searcher.parseCompoundPharmacologyResponse(response);};searcher.compoundPharmacology('http://www.conceptwiki.org/concept/38932552-111f-4a4e-a46a-4ed1d7bdf9d5', null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, 1, 20, null, null, callback);</code></pre>
+    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/2.1", "appID", "appKey");
+var callback=function(success, status, response){
+    var pharmacologyResult == searcher.parseCompoundPharmacologyResponse(response);
+};
+searcher.compoundPharmacology('http://www.conceptwiki.org/concept/38932552-111f-4a4e-a46a-4ed1d7bdf9d5', null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, 1, 20, null, null, callback);</code></pre>
 
 
 
@@ -2629,7 +2639,11 @@ <h5>Parameters:</h5>
 
     <h5>Example</h5>
 
-    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/1.5", "appID", "appKey");var callback=function(success, status, response){    var pharmacologyResult == searcher.parseCompoundPharmacologyCountResponse(response);};searcher.compoundPharmacologyCount('http://www.conceptwiki.org/concept/38932552-111f-4a4e-a46a-4ed1d7bdf9d5', null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, callback);</code></pre>
+    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/2.1", "appID", "appKey");
+var callback=function(success, status, response){
+    var pharmacologyResult == searcher.parseCompoundPharmacologyCountResponse(response);
+};
+searcher.compoundPharmacologyCount('http://www.conceptwiki.org/concept/38932552-111f-4a4e-a46a-4ed1d7bdf9d5', null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, callback);</code></pre>
 
 
 
@@ -2839,7 +2853,11 @@ <h5>Parameters:</h5>
 
     <h5>Example</h5>
 
-    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/1.5", "appID", "appKey");var callback=function(success, status, response){   var compoundResult = searcher.parseCompoundResponse(response);};searcher.fetchCompound('http://www.conceptwiki.org/concept/38932552-111f-4a4e-a46a-4ed1d7bdf9d5', null, callback);</code></pre>
+    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/2.1", "appID", "appKey");
+var callback=function(success, status, response){
+   var compoundResult = searcher.parseCompoundResponse(response);
+};
+searcher.fetchCompound('http://www.conceptwiki.org/concept/38932552-111f-4a4e-a46a-4ed1d7bdf9d5', null, callback);</code></pre>
 
 
 
@@ -3049,7 +3067,11 @@ <h5>Parameters:</h5>
 
     <h5>Example</h5>
 
-    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/1.5", "appID", "appKey");var callback=function(success, status, response){   var compoundResults = searcher.parseCompoundBatchResponse(response);};searcher.fetchCompoundBatch(['http://www.conceptwiki.org/concept/38932552-111f-4a4e-a46a-4ed1d7bdf9d5', 'http://www.conceptwiki.org/concept/dd758846-1dac-4f0d-a329-06af9a7fa413'], null, callback);</code></pre>
+    <pre class="prettyprint"><code>var searcher = new CompoundSearch("https://beta.openphacts.org/2.1", "appID", "appKey");
+var callback=function(success, status, response){
+   var compoundResults = searcher.parseCompoundBatchResponse(response);
+};
+searcher.fetchCompoundBatch(['http://www.conceptwiki.org/concept/38932552-111f-4a4e-a46a-4ed1d7bdf9d5', 'http://www.conceptwiki.org/concept/dd758846-1dac-4f0d-a329-06af9a7fa413'], null, callback);</code></pre>
 
 
 
@@ -4140,13 +4162,13 @@ <h5>Returns:</h5>
 </div>
 
 <nav>
-    <h2><a href="index.html">Home</a></h2><h3>Classes</h3><ul><li><a href="ActivitySearch.html">ActivitySearch</a></li><li><a href="CompoundSearch.html">CompoundSearch</a></li><li><a href="ConceptWikiSearch.html">ConceptWikiSearch</a></li><li><a href="DataSources.html">DataSources</a></li><li><a href="DiseaseSearch.html">DiseaseSearch</a></li><li><a href="MapSearch.html">MapSearch</a></li><li><a href="PathwaySearch.html">PathwaySearch</a></li><li><a href="StructureSearch.html">StructureSearch</a></li><li><a href="TargetSearch.html">TargetSearch</a></li><li><a href="TissueSearch.html">TissueSearch</a></li><li><a href="TreeSearch.html">TreeSearch</a></li><li><a href="Version.html">Version</a></li></ul><h3>Namespaces</h3><ul><li><a href="Openphacts.html">Openphacts</a></li></ul><h3>Global</h3><ul><li><a href="global.html#arrayify">arrayify</a></li><li><a href="global.html#encodeParams">encodeParams</a></li></ul>
+    <h2><a href="index.html">Home</a></h2><h3>Classes</h3><ul><li><a href="ActivitySearch.html">ActivitySearch</a></li><li><a href="CompoundSearch.html">CompoundSearch</a></li><li><a href="ConceptWikiSearch.html">ConceptWikiSearch</a></li><li><a href="DataSources.html">DataSources</a></li><li><a href="DiseaseSearch.html">DiseaseSearch</a></li><li><a href="MapSearch.html">MapSearch</a></li><li><a href="PathwaySearch.html">PathwaySearch</a></li><li><a href="StructureSearch.html">StructureSearch</a></li><li><a href="TargetSearch.html">TargetSearch</a></li><li><a href="TissueSearch.html">TissueSearch</a></li><li><a href="TreeSearch.html">TreeSearch</a></li><li><a href="Version.html">Version</a></li></ul><h3>Namespaces</h3><ul><li><a href="Openphacts.html">Openphacts</a></li></ul><h3>Global</h3><ul><li><a href="global.html#arrayify">arrayify</a></li><li><a href="global.html#debug">debug</a></li><li><a href="global.html#encodeParams">encodeParams</a></li><li><a href="global.html#nets">nets</a></li></ul>
 </nav>
 
 <br class="clear">
 
 <footer>
-    Documentation generated by <a href="https://github.com/jsdoc3/jsdoc">JSDoc 3.3.2</a> on Wed Jul 22 2015 13:50:06 GMT+0100 (GMT Daylight Time)
+    Documentation generated by <a href="https://github.com/jsdoc3/jsdoc">JSDoc 3.4.3</a> on Sun Nov 20 2016 17:15:04 GMT+0100 (CET)
 </footer>
 
 <script> prettyPrint(); </script>