self-hosted-gpu-test #89
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: self-hosted-gpu-test | |
| on: | |
| push: | |
| branches: | |
| - master | |
| workflow_dispatch: | |
| schedule: | |
| # weekly tests | |
| - cron: "0 0 * * SUN" | |
| jobs: | |
| start-runner: | |
| name: Start self-hosted EC2 runner | |
| runs-on: ubuntu-latest | |
| outputs: | |
| label: ${{ steps.start-ec2-runner.outputs.label }} | |
| ec2-instance-id: ${{ steps.start-ec2-runner.outputs.ec2-instance-id }} | |
| steps: | |
| - name: Configure AWS credentials | |
| uses: aws-actions/configure-aws-credentials@v1 | |
| with: | |
| aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| aws-region: ${{ secrets.AWS_REGION }} | |
| - name: Try to start EC2 runner | |
| id: start-ec2-runner | |
| uses: machulav/ec2-github-runner@main | |
| with: | |
| mode: start | |
| github-token: ${{ secrets.GH_PERSONAL_ACCESS_TOKEN }} | |
| ec2-image-id: ami-04d16a12bbc76ff0b | |
| ec2-instance-type: g4dn.xlarge | |
| subnet-id: subnet-0dee8543e12afe0cd # us-east-1a | |
| security-group-id: sg-0f9809618550edb98 | |
| # iam-role-name: self-hosted-runner # optional, requires additional permissions | |
| aws-resource-tags: > # optional, requires additional permissions | |
| [ | |
| {"Key": "Name", "Value": "ec2-github-runner"}, | |
| {"Key": "GitHubRepository", "Value": "${{ github.repository }}"} | |
| ] | |
| do-the-job: | |
| name: Do the job on the runner | |
| needs: start-runner # required to start the main job when the runner is ready | |
| runs-on: ${{ needs.start-runner.outputs.label }} # run the job on the newly created runner | |
| timeout-minutes: 120 # 2 hrs | |
| env: | |
| HOME: /home/ec2-user | |
| os: ubuntu-22.04 | |
| cuda-version: "11.7" | |
| gcc-version: "10.3.*" | |
| nvcc-version: "11.7" | |
| python-version: "3.10" | |
| pytorch-version: "1.12.*" | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: "Update the conda enviroment file" | |
| uses: cschleiden/replace-tokens@v1 | |
| with: | |
| tokenPrefix: '@' | |
| tokenSuffix: '@' | |
| files: devtools/conda-envs/build-${{ env.os }}.yml | |
| env: | |
| CUDATOOLKIT_VERSION: ${{ env.cuda-version }} | |
| GCC_VERSION: ${{ env.gcc-version }} | |
| NVCC_VERSION: ${{ env.nvcc-version }} | |
| PYTORCH_VERSION: ${{ env.pytorch-version }} | |
| - uses: mamba-org/provision-with-micromamba@main | |
| name: "Install dependencies with MicroMamba" | |
| with: | |
| environment-file: devtools/conda-envs/build-${{ env.os }}.yml | |
| extra-specs: | | |
| python==${{ env.python-version }} | |
| pytest-xdist | |
| - name: "List conda packages" | |
| shell: bash -l {0} | |
| run: | | |
| micromamba list | |
| micromamba info | |
| - name: "Configure" | |
| shell: bash -l {0} | |
| run: | | |
| mkdir build | |
| cd build | |
| SHLIB_EXT=".so" | |
| cmake .. \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -DCMAKE_INSTALL_PREFIX=${CONDA_PREFIX} \ | |
| -DOPENMM_DIR=${CONDA_PREFIX} \ | |
| -DTorch_DIR=${CONDA_PREFIX}/lib/python${{ env.python-version }}/site-packages/torch/share/cmake/Torch \ | |
| -DNN_BUILD_OPENCL_LIB=ON \ | |
| -DOPENCL_INCLUDE_DIR=${CONDA_PREFIX}/include \ | |
| -DOPENCL_LIBRARY=${CONDA_PREFIX}/lib/libOpenCL${SHLIB_EXT} | |
| - name: "Build" | |
| shell: bash -l {0} | |
| run: | | |
| cd build | |
| make -j2 install | |
| make -j2 PythonInstall | |
| - name: "List plugins" | |
| shell: bash -l {0} | |
| run: | | |
| export LD_LIBRARY_PATH="${CONDA_PREFIX}/lib/python${{ env.python-version }}/site-packages/torch/lib:${LD_LIBRARY_PATH}" | |
| python -c "import openmm as mm; print('---Loaded---', *mm.pluginLoadedLibNames, '---Failed---', *mm.Platform.getPluginLoadFailures(), sep='\n')" | |
| - name: "Run C++ test" | |
| shell: bash -l {0} | |
| run: | | |
| export LD_LIBRARY_PATH="${CONDA_PREFIX}/lib/python${{ env.python-version }}/site-packages/torch/lib:${LD_LIBRARY_PATH}" | |
| cd build | |
| ctest --output-on-failure | |
| - name: "Run Python test" | |
| shell: bash -l {0} | |
| run: | | |
| export LD_LIBRARY_PATH="${CONDA_PREFIX}/lib/python${{ env.python-version }}/site-packages/torch/lib:${LD_LIBRARY_PATH}" | |
| cd python/tests | |
| pytest -n auto --verbose Test* | |
| stop-runner: | |
| name: Stop self-hosted EC2 runner | |
| needs: | |
| - start-runner # required to get output from the start-runner job | |
| - do-the-job # required to wait when the main job is done | |
| runs-on: ubuntu-latest | |
| if: ${{ always() }} # required to stop the runner even if the error happened in the previous jobs | |
| steps: | |
| - name: Configure AWS credentials | |
| uses: aws-actions/configure-aws-credentials@v1 | |
| with: | |
| aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| aws-region: ${{ secrets.AWS_REGION }} | |
| - name: Stop EC2 runner | |
| uses: machulav/ec2-github-runner@main | |
| with: | |
| mode: stop | |
| github-token: ${{ secrets.GH_PERSONAL_ACCESS_TOKEN }} | |
| label: ${{ needs.start-runner.outputs.label }} | |
| ec2-instance-id: ${{ needs.start-runner.outputs.ec2-instance-id }} |