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ext-tools: add python3-pip
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imedina committed Oct 10, 2024
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2 changes: 1 addition & 1 deletion opencga-app/app/cloud/docker/opencga-ext-tools/Dockerfile
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Expand Up @@ -12,7 +12,7 @@ RUN apt-get update -y && \
## 1. Install system dependencies
DEBIAN_FRONTEND="noninteractive" TZ="Europe/London" apt-get install -y libcurl4 git libgmp-dev libcurl4-openssl-dev libgit2-dev build-essential \
libssl-dev libssh-dev libxml2-dev libfontconfig1-dev libharfbuzz-dev libfribidi-dev libfreetype6-dev libpng-dev libtiff5-dev libjpeg-dev \
gnuplot pandoc samtools bcftools tabix fastqc plink1.9 bwa r-base wget libopenblas0-openmp libcholmod3 libsuitesparse-dev && \
gnuplot pandoc samtools bcftools tabix fastqc plink1.9 bwa r-base wget libopenblas0-openmp libcholmod3 libsuitesparse-dev python3 python3-pip && \
apt-get remove libopenblas0-pthread && \
pip3 install pydantic && \

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