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A Specialized Bioinformatics Toolkit Designed for Analyzing both Single-cell and Spatial Transcriptome Sequencing Data from Hematopoietic Cells

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HemaScopeR (We are currently undergoing a major version update. During this process, this version may not work properly. Please stay tuned for further updates. Thank you.)

Fig. 1 Authors: Zhenyi Wang and Yuxin Miao

Any suggestions and remarks might be addressed to Zhenyi Wang via [email protected], to Yuxin Miao via [email protected], or 'Issues', and the authors will reply and address the issue within 12 hours.

HemaScopeR is a specialized bioinformatics toolkit designed for analyzing both single-cell and spatial transcriptome sequencing data from hematopoietic cells, including myeloid and lymphoid lineages.

HemaScopeR is described in the manuscript entitled:
[HemaScopeR: A Specialized Bioinformatics Toolkit Designed for Analyzing both Single-cell and Spatial Transcriptome Sequencing Data from Hematopoietic Cells](under revision).

Installation

  • To install, follow the instructions in INSTALL.md

Tutorial

  • For usage instructions, follow the commands in TUTORIAL.md

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A Specialized Bioinformatics Toolkit Designed for Analyzing both Single-cell and Spatial Transcriptome Sequencing Data from Hematopoietic Cells

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  • R 97.2%
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