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Jorrit Poelen
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Jan 17, 2024
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layout: member | ||
id: pierre-marie-allard | ||
name: Pierre-Marie Allard | ||
email: [email protected] | ||
homepage: https://www.unifr.ch/bio/en/groups/allard/ | ||
lat: 46.79334 | ||
long: 7.15583 | ||
affiliation: COMMONS Lab, Department of Biology, University of Fribourg, Switzerland | ||
github: oolonek | ||
orcid: https://orcid.org/0000-0003-3389-2191 | ||
wikidata: https://www.wikidata.org/wiki/Q56451301 | ||
scholia: https://scholia.toolforge.org/author/Q56451301 | ||
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Pierre-Marie is a natural products chemist working at the University of Fribourg in Switzerland. | ||
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## Collaboration statement | ||
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I am interested in transforming untargeted metabolomics datasets to [Linked Open Data](https://handbook.opendata.swiss/de/content/glossar/bibliothek/linked-open-data.html). In the [COMMONS Lab](https://www.unifr.ch/bio/en/groups/allard/) we explore the potential of semantic web technologies and Open Science to better explore, organize and share information regarding the chemical constituents of living systems. We have recently launched the [Earth Metabolome Initiative](https://www.earthmetabolome.org/), which is an Open Science project aiming to characterize chemodiversity at the globale scale. For this we first build a pilot, the [Digital Botanical Gardens Initiative](https://www.dbgi.org/), where we focuss on the characterization of the chemistry of living botanical collections. | ||
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- In a first move we do not plan to acquire traits but would rather like to integrate existing traits databases to Knowledge Graphs (KG) of metabolomics datasets. See the [ENPKG](https://enpkg.commons-lab.org/) for an example of such a KG. | ||
- Later on, we would like to integrate traits measurement with the sample collection process. | ||
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We are looking forward to exchange with the Open Traits Network ! |