Skip to content

Commit

Permalink
Update workflows to Onix1 namespace pt. 3
Browse files Browse the repository at this point in the history 
- Not all files underwent the OpenEphys.Onix -> OpenEphysOnix1 refactor
  previously. This is fixed now
  • Loading branch information
@cjsha
cjsha committed Aug 5, 2024
1 parent ede7368 commit ff9baa7
Show file tree
Hide file tree
Showing 8 changed files with 687 additions and 687 deletions.
96 changes: 48 additions & 48 deletions workflows/devices/OpticalStimulator.bonsai
View file
Original file line number Diff line number Diff line change
Expand Up @@ -7,48 +7,48 @@
<Workflow>
<Nodes>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:CreateContext">
<onix:Driver>riffa</onix:Driver>
<onix:Index>0</onix:Index>
<Combinator xsi:type="onix1:CreateContext">
<onix1:Driver>riffa</onix1:Driver>
<onix1:Index>0</onix1:Index>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:ConfigureHeadstage64">
<onix:Name>Headstage64</onix:Name>
<onix:Rhd2164>
<onix:DeviceName>Headstage64/Rhd2164</onix:DeviceName>
<onix:DeviceAddress>256</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
<onix:DspCutoff>Dsp146mHz</onix:DspCutoff>
<onix:AnalogLowCutoff>Low100mHz</onix:AnalogLowCutoff>
<onix:AnalogHighCutoff>High10000Hz</onix:AnalogHighCutoff>
</onix:Rhd2164>
<onix:Bno055>
<onix:DeviceName>Headstage64/Bno055</onix:DeviceName>
<onix:DeviceAddress>257</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
</onix:Bno055>
<onix:TS4231>
<onix:DeviceName>Headstage64/TS4231</onix:DeviceName>
<onix:DeviceAddress>258</onix:DeviceAddress>
<onix:Enable>false</onix:Enable>
</onix:TS4231>
<onix:ElectricalStimulator>
<onix:DeviceName>Headstage64/Headstage64ElectricalStimulator</onix:DeviceName>
<onix:DeviceAddress>259</onix:DeviceAddress>
</onix:ElectricalStimulator>
<onix:OpticalStimulator>
<onix:DeviceName>Headstage64/Headstage64OpticalStimulator</onix:DeviceName>
<onix:DeviceAddress>260</onix:DeviceAddress>
</onix:OpticalStimulator>
<onix:Port>PortA</onix:Port>
<onix:PortVoltage xsi:nil="true" />
<Combinator xsi:type="onix1:ConfigureHeadstage64">
<onix1:Name>Headstage64</onix1:Name>
<onix1:Rhd2164>
<onix1:DeviceName>Headstage64/Rhd2164</onix1:DeviceName>
<onix1:DeviceAddress>256</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
<onix1:DspCutoff>Dsp146mHz</onix1:DspCutoff>
<onix1:AnalogLowCutoff>Low100mHz</onix1:AnalogLowCutoff>
<onix1:AnalogHighCutoff>High10000Hz</onix1:AnalogHighCutoff>
</onix1:Rhd2164>
<onix1:Bno055>
<onix1:DeviceName>Headstage64/Bno055</onix1:DeviceName>
<onix1:DeviceAddress>257</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
</onix1:Bno055>
<onix1:TS4231>
<onix1:DeviceName>Headstage64/TS4231</onix1:DeviceName>
<onix1:DeviceAddress>258</onix1:DeviceAddress>
<onix1:Enable>false</onix1:Enable>
</onix1:TS4231>
<onix1:ElectricalStimulator>
<onix1:DeviceName>Headstage64/Headstage64ElectricalStimulator</onix1:DeviceName>
<onix1:DeviceAddress>259</onix1:DeviceAddress>
</onix1:ElectricalStimulator>
<onix1:OpticalStimulator>
<onix1:DeviceName>Headstage64/Headstage64OpticalStimulator</onix1:DeviceName>
<onix1:DeviceAddress>260</onix1:DeviceAddress>
</onix1:OpticalStimulator>
<onix1:Port>PortA</onix1:Port>
<onix1:PortVoltage xsi:nil="true" />
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:StartAcquisition">
<onix:ReadSize>2048</onix:ReadSize>
<onix:WriteSize>2048</onix:WriteSize>
<Combinator xsi:type="onix1:StartAcquisition">
<onix1:ReadSize>2048</onix1:ReadSize>
<onix1:WriteSize>2048</onix1:WriteSize>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
Expand All @@ -62,18 +62,18 @@
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:Headstage64OpticalStimulatorTrigger">
<onix:DeviceName>Headstage64/Headstage64OpticalStimulator</onix:DeviceName>
<onix:Enable>true</onix:Enable>
<onix:Delay>0</onix:Delay>
<onix:MaxCurrent>100</onix:MaxCurrent>
<onix:ChannelOneCurrent>100</onix:ChannelOneCurrent>
<onix:ChannelTwoCurrent>0</onix:ChannelTwoCurrent>
<onix:PulseDuration>5</onix:PulseDuration>
<onix:PulsesPerSecond>50</onix:PulsesPerSecond>
<onix:PulsesPerBurst>20</onix:PulsesPerBurst>
<onix:InterBurstInterval>0</onix:InterBurstInterval>
<onix:BurstsPerTrain>1</onix:BurstsPerTrain>
<Combinator xsi:type="onix1:Headstage64OpticalStimulatorTrigger">
<onix1:DeviceName>Headstage64/Headstage64OpticalStimulator</onix1:DeviceName>
<onix1:Enable>true</onix1:Enable>
<onix1:Delay>0</onix1:Delay>
<onix1:MaxCurrent>100</onix1:MaxCurrent>
<onix1:ChannelOneCurrent>100</onix1:ChannelOneCurrent>
<onix1:ChannelTwoCurrent>0</onix1:ChannelTwoCurrent>
<onix1:PulseDuration>5</onix1:PulseDuration>
<onix1:PulsesPerSecond>50</onix1:PulsesPerSecond>
<onix1:PulsesPerBurst>20</onix1:PulsesPerBurst>
<onix1:InterBurstInterval>0</onix1:InterBurstInterval>
<onix1:BurstsPerTrain>1</onix1:BurstsPerTrain>
</Combinator>
</Expression>
</Nodes>
Expand Down
72 changes: 36 additions & 36 deletions workflows/devices/Rhd2164.bonsai
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,51 +6,51 @@
<Workflow>
<Nodes>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:CreateContext">
<onix:Driver>riffa</onix:Driver>
<onix:Index>0</onix:Index>
<Combinator xsi:type="onix1:CreateContext">
<onix1:Driver>riffa</onix1:Driver>
<onix1:Index>0</onix1:Index>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:ConfigureHeadstage64">
<onix:Name>Headstage64</onix:Name>
<onix:Rhd2164>
<onix:DeviceName>Headstage64/Rhd2164</onix:DeviceName>
<onix:DeviceAddress>256</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
<onix:AmplifierDataFormat>Unsigned</onix:AmplifierDataFormat>
<onix:DspCutoff>Dsp146mHz</onix:DspCutoff>
<onix:AnalogLowCutoff>Low100mHz</onix:AnalogLowCutoff>
<onix:AnalogHighCutoff>High10000Hz</onix:AnalogHighCutoff>
</onix:Rhd2164>
<onix:Bno055>
<onix:DeviceName>Headstage64/Bno055</onix:DeviceName>
<onix:DeviceAddress>257</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
</onix:Bno055>
<onix:TS4231>
<onix:DeviceName>Headstage64/TS4231</onix:DeviceName>
<onix:DeviceAddress>258</onix:DeviceAddress>
<onix:Enable>false</onix:Enable>
</onix:TS4231>
<onix:ElectricalStimulator>
<onix:DeviceName>Headstage64/Headstage64ElectricalStimulator</onix:DeviceName>
<onix:DeviceAddress>259</onix:DeviceAddress>
</onix:ElectricalStimulator>
<onix:Port>PortA</onix:Port>
<onix:PortVoltage xsi:nil="true" />
<Combinator xsi:type="onix1:ConfigureHeadstage64">
<onix1:Name>Headstage64</onix1:Name>
<onix1:Rhd2164>
<onix1:DeviceName>Headstage64/Rhd2164</onix1:DeviceName>
<onix1:DeviceAddress>256</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
<onix1:AmplifierDataFormat>Unsigned</onix1:AmplifierDataFormat>
<onix1:DspCutoff>Dsp146mHz</onix1:DspCutoff>
<onix1:AnalogLowCutoff>Low100mHz</onix1:AnalogLowCutoff>
<onix1:AnalogHighCutoff>High10000Hz</onix1:AnalogHighCutoff>
</onix1:Rhd2164>
<onix1:Bno055>
<onix1:DeviceName>Headstage64/Bno055</onix1:DeviceName>
<onix1:DeviceAddress>257</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
</onix1:Bno055>
<onix1:TS4231>
<onix1:DeviceName>Headstage64/TS4231</onix1:DeviceName>
<onix1:DeviceAddress>258</onix1:DeviceAddress>
<onix1:Enable>false</onix1:Enable>
</onix1:TS4231>
<onix1:ElectricalStimulator>
<onix1:DeviceName>Headstage64/Headstage64ElectricalStimulator</onix1:DeviceName>
<onix1:DeviceAddress>259</onix1:DeviceAddress>
</onix1:ElectricalStimulator>
<onix1:Port>PortA</onix1:Port>
<onix1:PortVoltage xsi:nil="true" />
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:StartAcquisition">
<onix:ReadSize>2048</onix:ReadSize>
<onix:WriteSize>2048</onix:WriteSize>
<Combinator xsi:type="onix1:StartAcquisition">
<onix1:ReadSize>2048</onix1:ReadSize>
<onix1:WriteSize>2048</onix1:WriteSize>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:Rhd2164Data">
<onix:DeviceName>Headstage64/Rhd2164</onix:DeviceName>
<onix:BufferSize>30</onix:BufferSize>
<Combinator xsi:type="onix1:Rhd2164Data">
<onix1:DeviceName>Headstage64/Rhd2164</onix1:DeviceName>
<onix1:BufferSize>30</onix1:BufferSize>
</Combinator>
</Expression>
<Expression xsi:type="MemberSelector">
Expand Down
20 changes: 10 additions & 10 deletions workflows/operators/ConfigureBreakoutDigitalIO.bonsai
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,22 +6,22 @@
<Workflow>
<Nodes>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:CreateContext">
<onix:Driver>riffa</onix:Driver>
<onix:Index>0</onix:Index>
<Combinator xsi:type="onix1:CreateContext">
<onix1:Driver>riffa</onix1:Driver>
<onix1:Index>0</onix1:Index>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:ConfigureBreakoutDigitalIO">
<onix:DeviceName>DigitalIO</onix:DeviceName>
<onix:DeviceAddress>7</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
<Combinator xsi:type="onix1:ConfigureBreakoutDigitalIO">
<onix1:DeviceName>DigitalIO</onix1:DeviceName>
<onix1:DeviceAddress>7</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:StartAcquisition">
<onix:ReadSize>2048</onix:ReadSize>
<onix:WriteSize>2048</onix:WriteSize>
<Combinator xsi:type="onix1:StartAcquisition">
<onix1:ReadSize>2048</onix1:ReadSize>
<onix1:WriteSize>2048</onix1:WriteSize>
</Combinator>
</Expression>
</Nodes>
Expand Down
30 changes: 15 additions & 15 deletions workflows/operators/ConfigureNeuropixelsV1e.bonsai
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,27 +6,27 @@
<Workflow>
<Nodes>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:CreateContext">
<onix:Driver>riffa</onix:Driver>
<onix:Index>0</onix:Index>
<Combinator xsi:type="onix1:CreateContext">
<onix1:Driver>riffa</onix1:Driver>
<onix1:Index>0</onix1:Index>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:ConfigureNeuropixelsV1e">
<onix:DeviceName>NeuropixelsV1eHeadstage/NeuropixelsV1e</onix:DeviceName>
<onix:DeviceAddress>256</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
<onix:EnableLed>true</onix:EnableLed>
<onix:SpikeAmplifierGain>Gain1000</onix:SpikeAmplifierGain>
<onix:LfpAmplifierGain>Gain50</onix:LfpAmplifierGain>
<onix:Reference>External</onix:Reference>
<onix:SpikeFilter>true</onix:SpikeFilter>
<Combinator xsi:type="onix1:ConfigureNeuropixelsV1e">
<onix1:DeviceName>NeuropixelsV1eHeadstage/NeuropixelsV1e</onix1:DeviceName>
<onix1:DeviceAddress>256</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
<onix1:EnableLed>true</onix1:EnableLed>
<onix1:SpikeAmplifierGain>Gain1000</onix1:SpikeAmplifierGain>
<onix1:LfpAmplifierGain>Gain50</onix1:LfpAmplifierGain>
<onix1:Reference>External</onix1:Reference>
<onix1:SpikeFilter>true</onix1:SpikeFilter>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:StartAcquisition">
<onix:ReadSize>2048</onix:ReadSize>
<onix:WriteSize>2048</onix:WriteSize>
<Combinator xsi:type="onix1:StartAcquisition">
<onix1:ReadSize>2048</onix1:ReadSize>
<onix1:WriteSize>2048</onix1:WriteSize>
</Combinator>
</Expression>
</Nodes>
Expand Down
20 changes: 10 additions & 10 deletions workflows/operators/ConfigureNeuropixelsV1eBno055.bonsai
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,22 +6,22 @@
<Workflow>
<Nodes>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:CreateContext">
<onix:Driver>riffa</onix:Driver>
<onix:Index>0</onix:Index>
<Combinator xsi:type="onix1:CreateContext">
<onix1:Driver>riffa</onix1:Driver>
<onix1:Index>0</onix1:Index>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:ConfigureNeuropixelsV1eBno055">
<onix:DeviceName>NeuropixelsV1eHeadstage/NeuropixelsV1eBno055</onix:DeviceName>
<onix:DeviceAddress>257</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
<Combinator xsi:type="onix1:ConfigureNeuropixelsV1eBno055">
<onix1:DeviceName>NeuropixelsV1eHeadstage/NeuropixelsV1eBno055</onix1:DeviceName>
<onix1:DeviceAddress>257</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:StartAcquisition">
<onix:ReadSize>2048</onix:ReadSize>
<onix:WriteSize>2048</onix:WriteSize>
<Combinator xsi:type="onix1:StartAcquisition">
<onix1:ReadSize>2048</onix1:ReadSize>
<onix1:WriteSize>2048</onix1:WriteSize>
</Combinator>
</Expression>
</Nodes>
Expand Down
50 changes: 25 additions & 25 deletions workflows/operators/ConfigureNeuropixelsV1eHeadstage.bonsai
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,37 +6,37 @@
<Workflow>
<Nodes>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:CreateContext">
<onix:Driver>riffa</onix:Driver>
<onix:Index>0</onix:Index>
<Combinator xsi:type="onix1:CreateContext">
<onix1:Driver>riffa</onix1:Driver>
<onix1:Index>0</onix1:Index>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:ConfigureNeuropixelsV1eHeadstage">
<onix:Name>NeuropixelsV1eHeadstage</onix:Name>
<onix:NeuropixelsV1>
<onix:DeviceName>NeuropixelsV1eHeadstage/NeuropixelsV1e</onix:DeviceName>
<onix:DeviceAddress>256</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
<onix:EnableLed>true</onix:EnableLed>
<onix:SpikeAmplifierGain>Gain1000</onix:SpikeAmplifierGain>
<onix:LfpAmplifierGain>Gain50</onix:LfpAmplifierGain>
<onix:Reference>External</onix:Reference>
<onix:SpikeFilter>true</onix:SpikeFilter>
</onix:NeuropixelsV1>
<onix:Bno055>
<onix:DeviceName>NeuropixelsV1eHeadstage/NeuropixelsV1eBno055</onix:DeviceName>
<onix:DeviceAddress>257</onix:DeviceAddress>
<onix:Enable>true</onix:Enable>
</onix:Bno055>
<onix:Port>PortA</onix:Port>
<onix:PortVoltage xsi:nil="true" />
<Combinator xsi:type="onix1:ConfigureNeuropixelsV1eHeadstage">
<onix1:Name>NeuropixelsV1eHeadstage</onix1:Name>
<onix1:NeuropixelsV1>
<onix1:DeviceName>NeuropixelsV1eHeadstage/NeuropixelsV1e</onix1:DeviceName>
<onix1:DeviceAddress>256</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
<onix1:EnableLed>true</onix1:EnableLed>
<onix1:SpikeAmplifierGain>Gain1000</onix1:SpikeAmplifierGain>
<onix1:LfpAmplifierGain>Gain50</onix1:LfpAmplifierGain>
<onix1:Reference>External</onix1:Reference>
<onix1:SpikeFilter>true</onix1:SpikeFilter>
</onix1:NeuropixelsV1>
<onix1:Bno055>
<onix1:DeviceName>NeuropixelsV1eHeadstage/NeuropixelsV1eBno055</onix1:DeviceName>
<onix1:DeviceAddress>257</onix1:DeviceAddress>
<onix1:Enable>true</onix1:Enable>
</onix1:Bno055>
<onix1:Port>PortA</onix1:Port>
<onix1:PortVoltage xsi:nil="true" />
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="onix:StartAcquisition">
<onix:ReadSize>2048</onix:ReadSize>
<onix:WriteSize>2048</onix:WriteSize>
<Combinator xsi:type="onix1:StartAcquisition">
<onix1:ReadSize>2048</onix1:ReadSize>
<onix1:WriteSize>2048</onix1:WriteSize>
</Combinator>
</Expression>
</Nodes>
Expand Down
Loading

0 comments on commit ff9baa7

Please sign in to comment.