Revert the contruction of empty objects with query ranges.

It cases breakage with plyranges::filter, which I can not debug at the moment.
oist · Jul 7, 2023 · 3411122 · 3411122
1 parent c365f0a
commit 3411122
Showing 1 changed file with 4 additions and 3 deletions.
diff --git a/R/GenomicBreaks.R b/R/GenomicBreaks.R
@@ -29,9 +29,10 @@ setMethod("initialize", "GBreaks", function(.Object, ..., target = NULL, query =
     gb <- GBreaks(gb)
     return(gb)
   }
-  gb <- callNextMethod(.Object, ...)
-  if (length(gb) == 0) gb$query <- GRanges()
-  gb
+  callNextMethod(.Object, ...)
+  # gb <- callNextMethod(.Object, ...)
+  # if (length(gb) == 0) gb$query <- GRanges()
+  # gb
 })
 
 #' Conversion from [`CNEr::Axt`] objects