Revert "Add initial helm charts for k8s deployments (#1080)"

This reverts commit 4f488dd.

.github/workflows/compliance.yaml

@@ -37,7 +37,7 @@ jobs:
       matrix:
         version: [1.0.0, 1.1.0]
         db: ["boltdb", "mongodb"]
-        compute: ["local"]
+        compute: ["local", "kubernetes"]
         storage: ["local", "s3"]
     needs: build
     runs-on: ubuntu-latest

deployments/kubernetes/README.md

@@ -1,3 +1,4 @@
+> [!WARNING]
 > Funnel's Kubernetes support is in active development and may involve frequent updates 🚧
 
 # Overview
@@ -21,19 +22,23 @@ Kuberenetes Resources:
 kubectl apply -f funnel-service.yml
 ```
 
+Get the clusterIP:
+
+```sh
+kubectl get services funnel --output=yaml | grep "clusterIP:"
+```
+
+Use this value to configure the server hostname of the worker config.
+
 ## 2. Create Funnel config files
 
 > *[funnel-server-config.yml](https://github.com/ohsu-comp-bio/funnel/blob/develop/deployments/kubernetes/funnel-server-config.yml)*
 
-> *[funnel-worker-config.yml](https://github.com/ohsu-comp-bio/funnel/blob/develop/deployments/kubernetes/funnel-worker-config.yml)*
-
-Get the clusterIP:
+We recommend setting `DisableJobCleanup` to `true` for debugging - otherwise failed jobs will be cleanup up.
 
-```sh
-export HOSTNAME=$(kubectl get services funnel --output=jsonpath='{.spec.clusterIP}')
+> *[funnel-worker-config.yml](https://github.com/ohsu-comp-bio/funnel/blob/develop/deployments/kubernetes/funnel-worker-config.yml)*
 
-sed -i "s|\${HOSTNAME}|${HOSTNAME}|g" funnel-worker-config.yml
-```
+***Remember to modify the file to have the actual server hostname.***
 
 ## 3. Create a ConfigMap
 

deployments/kubernetes/funnel-worker-config.yml

@@ -21,5 +21,5 @@ EventWriters:
   - log
 
 Server:
-  HostName: "${HOSTNAME}"
+  HostName: < funnel service clusterIP >
   RPCPort: 9090