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Merge pull request #164 from obophenotype/odk15-migration
ODK 1.5 migration
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Original file line number | Diff line number | Diff line change |
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#!/bin/sh | ||
ODK_DEBUG_FILE=${ODK_DEBUG_FILE:-debug.log} | ||
echo "Command: sh $@" >> $ODK_DEBUG_FILE | ||
/usr/bin/time -a -o $ODK_DEBUG_FILE -f "Elapsed time: %E\nPeak memory: %M kb" /bin/sh "$@" |
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# The purpose of this violation is to make sure people update | ||
# from using the deprecated DC Elements 1.1 namespace (http://purl.org/dc/elements/1.1/) | ||
# to using the recommended DC Terms namespace (http://purl.org/dc/terms/) | ||
# See also discussion on https://github.com/oborel/obo-relations/pull/692 | ||
|
||
SELECT ?term ?predicate WHERE { | ||
?term ?predicate ?value . | ||
FILTER(STRSTARTS(STR(?predicate), "http://purl.org/dc/elements/1.1/")) | ||
FILTER(isIRI(?term) && (STRSTARTS(str(?term), "http://purl.obolibrary.org/obo/XPO_"))) | ||
} | ||
|
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PREFIX replaced_by: <http://purl.obolibrary.org/obo/IAO_0100001> | ||
|
||
SELECT DISTINCT ?entity ?property ?value WHERE { | ||
VALUES ?property { | ||
replaced_by: | ||
} | ||
?entity ?property ?value1 . | ||
?entity ?property ?value2 . | ||
FILTER(?value1!=?value2) | ||
BIND(CONCAT(str(?value1), CONCAT("|", str(?value2))) as ?value) | ||
} | ||
|
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