GitHub - nservant/iced: Normalizing Hi-C contact counts efficiently

iced

The python module iced implements the ICE normalization of hic data

Depends on

python >= 2.6 numpy >= 0.17 scipy >= 0.13 pandas

Name	Name	Last commit message	Last commit date
Latest commit nservant synchro with original project Jan 15, 2017 6bdf284 · Jan 15, 2017 History 127 Commits
build_tools	build_tools	MAINT trying to fix the coverage…	Jan 10, 2017
continuous_integration	continuous_integration	MAINT trying to fix the coverage…	Jan 10, 2017
doc	doc	DOC added a tutorial	Jan 10, 2017
examples	examples	DOC added a tutorial	Jan 10, 2017
iced	iced	synchro with original project	Jan 15, 2017
.gitignore	.gitignore	ENH added .coverage to .gitignore	Jan 14, 2015
.travis.yml	.travis.yml	Attempt to activate coveralls	Jan 10, 2017
CITATION	CITATION	DOC added citation	Mar 16, 2016
CONTRIBUTORS	CONTRIBUTORS	MAINT adding Nicolas to contributors	Jan 10, 2017
COPYING	COPYING	DOC better theme	Sep 3, 2015
MANIFEST.in	MANIFEST.in	Now provides duan et al sample dataset	Feb 10, 2016
Makefile	Makefile	test-coverage now only performs coverage on iced	Sep 4, 2015
README.rst	README.rst	MAINT adding Nicolas to contributors	Jan 10, 2017
appveyor.yml	appveyor.yml	ENH add appveyor	Mar 4, 2016
setup.py	setup.py	Now working towards 0.4.0	Oct 10, 2016