move functions to data-raw folder

noaa-afsc · Aug 6, 2024 · deb0f02 · deb0f02
1 parent aeb8210
commit deb0f02
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Showing 2 changed files with 16 additions and 4 deletions.
diff --git a/R/get_data.R → data-raw/get_data.R b/R/get_data.R → data-raw/get_data.R
@@ -3,8 +3,9 @@ library(dbplyr)
 library(dplyr)
 library(RPostgres)
 library(sf)
-library(arrow)
 library(geoarrow)
+library(arrow)
+library(arcgis)
 
 get_deployments <- function() {
   tryCatch(
@@ -33,7 +34,7 @@ get_deployments <- function() {
     dplyr::left_join(tbl_speno, by = c("speno", "species")) |>
     dplyr::collect()
 
-  dbDisconnect(con)
+  DBI::dbDisconnect(con)
 
   return(tbl_deploy)
 }
@@ -66,7 +67,7 @@ get_locations <- function(tbl_deploy = NULL) {
     ) |>
     dplyr::filter(species == "Harbor seal")
 
-  dbDisconnect(con)
+  DBI::dbDisconnect(con)
 
   return(locs_obs)
 }
@@ -97,8 +98,17 @@ get_timelines <- function(tbl_deploy = NULL) {
       .default = NA
     )) 
 
-  dbDisconnect(con)
+  DBI::dbDisconnect(con)
 
   return(tbl_timelines)
 }
 
+get_survey_units <- function() {
+  feature_url <- 'https://services2.arcgis.com/C8EMgrsFcRFL6LrL/arcgis/rest/services/pv_cst_polys/FeatureServer'
+
+  ssu_sf <- arcgislayers::arc_open(feature_url) |> 
+    arcgislayers::get_layer(0) |> 
+    arcgislayers::arc_select()
+
+  return(ssu_sf)
+}
diff --git a/R/publish_data.R → data-raw/publish_data.R b/R/publish_data.R → data-raw/publish_data.R
@@ -1,8 +1,10 @@
+source('get_data.R')
 
 publish_data <- function() {
   deploy <- get_deployments()
   locations <- get_locations(deploy)
   timelines <- get_timelines(deploy)
+  ssu <- get_survey_units()
 
   bucket <- gs_bucket("pep_storage", anonymous = FALSE)
   fs <- GcsFileSystem$create(anonymous = FALSE)