updated actions versions #175
Workflow file for this run
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name: fsl_docker | |
on: [push, pull_request] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
env: | |
DOCKER_IMAGE: djarecka/fsl_py:6.0.4 | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
lfs: true | |
- name: Pull docker image | |
run: | | |
docker pull $DOCKER_IMAGE | |
# Have image running in background | |
docker run `bash <(curl -s https://codecov.io/env)` -itd --name fsl_cont -v `pwd`:/pydra_fsl $DOCKER_IMAGE | |
- name: Updating pydra | |
run: docker exec fsl_cont bash -c "pip install https://github.com/nipype/pydra/tarball/master && python -c 'import pydra; print(pydra.__version__)'" | |
- name: Run pytest | |
run: docker exec fsl_cont bash -c "pytest --color=yes -vs /pydra_fsl/pydra/tasks/fsl" | |
- name: removing container | |
run: docker rm -f fsl_cont |