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[ENH] Added available inputs for MRTrix3's 5ttgen #3658

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GalKepler
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Summary

Just a small addition of inputs to match those available through the original implementation of MRTrix3.

Fixes #3657.

List of changes proposed in this PR (pull-request)

Just some additional inputs (t2 file, mask file, etc.).

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codecov bot commented Jul 20, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 70.83%. Comparing base (e03ab6f) to head (386dd14).

Additional details and impacted files
@@           Coverage Diff           @@
##           master    #3658   +/-   ##
=======================================
  Coverage   70.82%   70.83%           
=======================================
  Files        1276     1276           
  Lines       59320    59329    +9     
  Branches     9826     9826           
=======================================
+ Hits        42016    42028   +12     
+ Misses      16133    16125    -8     
- Partials     1171     1176    +5     

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@GalKepler
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Not sure why the CI fails, but I would love to fix it if someone could help me locate the problem.

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[ENH] Enhance implementation of 5ttgen
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