dynamite error strategy

nf-core · Jan 4, 2025 · cb8e10a · cb8e10a
1 parent 45ba08d
commit cb8e10a
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/conf/modules.config b/conf/modules.config
@@ -126,7 +126,8 @@ process {
     }
 
     withName: "RUN_DYNAMITE" {
-        errorStrategy = "ignore"
+        //Produces an error if the input is too small and ends with exitStatus 139
+        errorStrategy = { task.exitStatus == 139 ? 'ignore' : 'retry' }
     }
 
     withName: ".*RANKING:CREATE_RANKING" {