Fix a couple of bottlenecks in the pipeline #362
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Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@0c45773b623bea8c8e75f6c82b208c3cf94ea4f9. Please update your workflow to use either v3 or v4 of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-12-05-notice-of-upcoming-releases-and-breaking-changes-for-github-actions/#actions-cache-v1-v2-and-actions-toolkit-cache-package-closing-down
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Set up job
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Check out pipeline code
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Set up Nextflow
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Set up nf-test
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Set up Apptainer
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Set up Singularity
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Cache pdiff
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Set up pdiff to see diff between nf-test snapshots
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Set up Miniconda
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Set up Conda
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Disk space cleanup
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Run tests | pipeline_docker | 3/5
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Publish Test Report
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Clean up
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Post Cache pdiff
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Post Set up Nextflow
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Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Post Check out pipeline code
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once the workflow run has completed.
Complete job
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