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Implementation of IsoformSwitchAnalyzeR #306

Implementation of IsoformSwitchAnalyzeR

Implementation of IsoformSwitchAnalyzeR #306

Triggered via pull request October 26, 2024 12:23
Status Cancelled
Total duration 16m 42s
Artifacts

ci.yml

on: pull_request
Matrix: Run full pipeline with test data
Matrix: Run DEXSeq pipeline with test data
Matrix: Run edgeR pipeline with test data
Matrix: Run full pipeline with FASTQ data
Matrix: Run full pipeline with genome BAM data
Matrix: Run rMATS pipeline with test data
Matrix: Run full pipeline with Salmon results data
Matrix: Run SUPPA pipeline with test data
Matrix: Run full pipeline with transcriptome BAM data
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11 errors and 13 warnings
Run full pipeline with Salmon results data (latest-everything)
Process completed with exit code 1.
Run full pipeline with Salmon results data (23.04.0)
The job was canceled because "latest-everything" failed.
Run full pipeline with Salmon results data (23.04.0)
Process completed with exit code 1.
Run full pipeline with test data (23.04.0)
Canceling since a higher priority waiting request for 'nf-core CI-142' exists
Run full pipeline with test data (23.04.0)
The operation was canceled.
Run full pipeline with FASTQ data (latest-everything)
Canceling since a higher priority waiting request for 'nf-core CI-142' exists
Run full pipeline with FASTQ data (latest-everything)
The operation was canceled.
Run full pipeline with test data (latest-everything)
Canceling since a higher priority waiting request for 'nf-core CI-142' exists
Run full pipeline with test data (latest-everything)
The operation was canceled.
Run full pipeline with FASTQ data (23.04.0)
Canceling since a higher priority waiting request for 'nf-core CI-142' exists
Run full pipeline with FASTQ data (23.04.0)
The operation was canceled.
Run full pipeline with Salmon results data (latest-everything)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run full pipeline with transcriptome BAM data (latest-everything)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run full pipeline with transcriptome BAM data (23.04.0)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run edgeR pipeline with test data (23.04.0)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run edgeR pipeline with test data (latest-everything)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run full pipeline with genome BAM data (23.04.0)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run full pipeline with genome BAM data (latest-everything)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run SUPPA pipeline with test data (23.04.0)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run SUPPA pipeline with test data (latest-everything)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run rMATS pipeline with test data (latest-everything)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run rMATS pipeline with test data (23.04.0)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run DEXSeq pipeline with test data (latest-everything)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run DEXSeq pipeline with test data (23.04.0)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/