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Fix paths to panel resources in panel_data.config
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bounlu authored Nov 18, 2024
1 parent 2fcec6a commit eef3235
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions conf/panel_data.config
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ params {
target_region_normalisation = 'copy_number/cobalt_normalisation.tso500.37.tsv'
target_region_ratios = 'copy_number/target_regions_ratios.tso500.37.tsv'
target_region_msi_indels = 'copy_number/target_regions_msi_indels.tso500.37.tsv'
isofox_tpm_norm = 'rna_resources/isofox.tso500_gene_normalisation.csv'
isofox_tpm_norm = 'rna_resources/isofox.gene_normalisation.tso500.37.csv'
isofox_gene_ids = 'rna_resources/tso500_rna_gene_ids.csv'
isofox_counts = 'rna_resources/read_93_exp_counts.37.csv'
isofox_gc_ratios = 'rna_resources/read_93_exp_gc_ratios.37.csv'
Expand All @@ -28,7 +28,7 @@ params {
target_region_normalisation = 'copy_number/cobalt_normalisation.tso500.38.tsv'
target_region_ratios = 'copy_number/target_regions_ratios.tso500.38.tsv'
target_region_msi_indels = 'copy_number/target_regions_msi_indels.tso500.38.tsv'
isofox_tpm_norm = 'rna_resources/isofox.tso500_gene_normalisation.csv'
isofox_tpm_norm = 'rna_resources/isofox.gene_normalisation.tso500.38.csv'
isofox_gene_ids = 'rna_resources/tso500_rna_gene_ids.csv'
isofox_counts = 'rna_resources/read_93_exp_counts.38.csv'
isofox_gc_ratios = 'rna_resources/read_93_exp_gc_ratios.38.csv'
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