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Apply Prettier linting to usage.md
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scwatts committed May 18, 2024
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Expand Up @@ -27,7 +27,7 @@ When starting from BAMs rather than FASTQ it is expected that:

- RNA read alignments are generated with STAR using [specific
parameters](https://github.com/hartwigmedical/hmftools/tree/master/isofox#a-note-on-alignment-and-multi-mapping), this
is __critical__ for WTS data, and
is **critical** for WTS data, and
- reads are aligned to a Hartwig-distributed reference genome ([custom genomes](#custom-genomes) can be used but are not
recommended)

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