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Apply @maxulysse recommendations
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Co-authored-by: Maxime U Garcia <[email protected]>
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scwatts and maxulysse authored Apr 3, 2024
1 parent f4703e5 commit 7adfda2
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions modules/local/virusbreakend/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -6,8 +6,8 @@ process VIRUSBREAKEND {

conda "${moduleDir}/environment.yml"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://pub-29f2e5b2b7384811bdbbcba44f8b5083.r2.dev/singularity/gridss:2.13.2--1' :
'quay.io/nf-core/gridss:2.13.2--1' }"
'https://pub-29f2e5b2b7384811bdbbcba44f8b5083.r2.dev/singularity/gridss:2.13.2--1':
'nf-core/gridss:2.13.2--1' }"

input:
tuple val(meta), path(bam)
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