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Merge pull request #381 from nf-core/fix/samplename-join #837

Merge pull request #381 from nf-core/fix/samplename-join

Merge pull request #381 from nf-core/fix/samplename-join #837

Triggered via push February 23, 2024 17:43
Status Success
Total duration 4m 14s
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ci.yml

on: push
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List Tests
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-23.04.0)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']
(docker-latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
(docker-latest-everything)
Unexpected input(s) 'path', valid inputs are ['token', 'github_token', 'report_paths', 'test_files_prefix', 'exclude_sources', 'suite_regex', 'annotate_only', 'update_check', 'check_name', 'commit', 'fail_on_failure', 'require_tests', 'require_passed_tests', 'include_passed', 'check_title_template', 'summary', 'check_retries', 'transformers', 'job_summary', 'detailed_summary', 'annotate_notice', 'follow_symlink', 'job_name', 'annotations_limit']