nf-core CI

update Germlinecnvcaller subworkflow #49

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Triggered via pull request February 21, 2024 14:05

ramprasadn

synchronize #19

ramprasadn:germlinecnvcallerupdate

Status Success

Total duration 11m 45s

Artifacts –

ci.yml

on: pull_request

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Choose nextflow versions to test against depending on target branch

Matrix: test-dev

Matrix: test-master

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5 warnings

Check for changes

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, dorny/paths-filter@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

default docker NXF 23.04.0

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: Wandalen/[email protected], actions/cache@v3, nf-core/[email protected]. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

default docker NXF 23.04.0

The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

germlinecnvcaller_cohort docker NXF 23.04.0

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: Wandalen/[email protected], actions/cache@v3, nf-core/[email protected]. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

germlinecnvcaller_cohort docker NXF 23.04.0

The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/