Update .github/workflows/awstest.yml

nf-core · Oct 16, 2020 · e46d3b7 · e46d3b7
1 parent 31211cf
commit e46d3b7
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/.github/workflows/awstest.yml b/.github/workflows/awstest.yml
@@ -40,4 +40,4 @@ jobs:
           --job-name nf-core-cageseq \
           --job-queue $AWS_JOB_QUEUE \
           --job-definition $AWS_JOB_DEFINITION \
-          --container-overrides '{"command": ["nf-core/cageseq", "-r '"${GITHUB_SHA}"' -profile test --outdir s3://'"${AWS_S3_BUCKET}"'/cageseq/results-'"${GITHUB_SHA}"' -w s3://'"${AWS_S3_BUCKET}"'/cageseq/work-'"${GITHUB_SHA}"' -with-tower"], "environment": [{"name": "TOWER_ACCESS_TOKEN", "value": "'"$TOWER_ACCESS_TOKEN"'"}]}'cageseq/work-'"${GITHUB_SHA}"' -with-tower"], "environment": [{"name": "TOWER_ACCESS_TOKEN", "value": "'"$TOWER_ACCESS_TOKEN"'"}]}'
+          --container-overrides '{"command": ["nf-core/cageseq", "-r '"${GITHUB_SHA}"' -profile test --outdir s3://'"${AWS_S3_BUCKET}"'/cageseq/results-'"${GITHUB_SHA}"' -w s3://'"${AWS_S3_BUCKET}"'/cageseq/work-'"${GITHUB_SHA}"' -with-tower"], "environment": [{"name": "TOWER_ACCESS_TOKEN", "value": "'"$TOWER_ACCESS_TOKEN"'"}]}