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fix missing mamba issue in github action #139

fix missing mamba issue in github action

fix missing mamba issue in github action #139

Workflow file for this run

name: unit-test
on:
workflow_dispatch:
pull_request:
push:
branches: [next, qa, main]
tags: ['v*']
jobs:
linux:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
auto-update-conda: true
channels: conda-forge,defaults
use-mamba: true
environment-file: environment.yml
activate-environment: test
- name: install additional dependencies
run: |
echo "installing additional dependencies if cannot be installed from conda"
- name: run unit tests
run: |
echo "running unit tests"
python -m pytest --cov=src --cov-report=xml --cov-report=term-missing tests/
- name: upload coverage to codecov
uses: codecov/codecov-action@v4
if:
github.actor != 'dependabot[bot]'
with:
token: ${{ secrets.CODECOV_TOKEN }}
- name: build conda package
run: |
# test that the conda package builds
cd conda.recipe
echo "versioningit $(versioningit ../)"
# conda channels could have been defined in the conda-incubator, but you can copy/paste the lines
# below to build the conda package in your local machine
CHANNELS="--channel mantid/label/main --channel conda-forge"
VERSION=$(versioningit ../) conda mambabuild $CHANNELS --output-folder . .
conda verify noarch/mypackagename*.tar.bz2