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code fixes issues #53, #49, #33, #59 - GUI update #56

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code fixes issues #53, #49, #33, #59 - GUI update #56

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Commits on Jul 30, 2024

  1. #27 avoid using and displaying hounsfield units for MODALITY == 'MRI'

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    delphinepilon committed Jul 30, 2024
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Commits on Jul 31, 2024

  1. #3 : initial commit, created shell for new windows

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    delphinepilon committed Jul 31, 2024
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  2. #3 : code behind select working output folder and minor fixes, WIP

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    delphinepilon committed Jul 31, 2024
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  3. #3 : add task option to interface and write selection to yml file, re… 

    …format yml based on format written by yaml.dump
    @delphinepilon
    delphinepilon committed Jul 31, 2024
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  4. #3 : add logic for modality selection in interface and write to yml

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    delphinepilon committed Jul 31, 2024
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  5. #3 : if ct and segmentation, ask whether to add semi-automatic PHE tool

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    delphinepilon committed Jul 31, 2024
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  6. #3 #27 add reference for semi-automatic PHE tool in first window

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    delphinepilon committed Jul 31, 2024
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  7. #3 : add option to impose bids when modality is mri, with code behind

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    delphinepilon committed Jul 31, 2024
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  8. #3 : add input file extension selection and code behind

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    delphinepilon committed Jul 31, 2024
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  9. #3 : add option of seeing which view first (red, yellow, green) and c… 

    …ode behind
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    delphinepilon committed Jul 31, 2024
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Commits on Aug 1, 2024

  1. #3 : add interpolate image option with code behind

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    delphinepilon committed Aug 1, 2024
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  2. #3 : update TODO

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    delphinepilon committed Aug 1, 2024
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  3. #3 : add window level and width when modality = ct, with code behind

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    delphinepilon committed Aug 1, 2024
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  4. #3 : add configuration of keyboard shortcuts and extra TODO for this … 

    …issue
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    delphinepilon committed Aug 1, 2024
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  5. #3 : add configuration for labels and code behind

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    delphinepilon committed Aug 1, 2024
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Commits on Aug 2, 2024

  1. #3 : reorg. lines, remove hardcoded default values instead take from … 

    …file, apply template default values
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    delphinepilon committed Aug 2, 2024
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Commits on Aug 4, 2024

  1. #3 : minor fixes to GUI cosmetic

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    delphinepilon committed Aug 4, 2024
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  2. #3 : fix edit labels behaviour to save upon save button instead of it… 

    …eratively
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    delphinepilon committed Aug 4, 2024
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  3. #3 #30 : remove verification of compatibility of configurations betwe… 

    …en the current config and the output folder

simplification : If this is a new configuration of SlicerCART (new or template), require empty output folder. Otherwise, we've taken the exact configuration and are working in the same directory as the selected output folder. In Issue #30, it can be revisited whether we would like to allow modifications to the configuration after having started the data collection (segmentation or classification) and which of these modifications should be allowed.
    @delphinepilon
    delphinepilon committed Aug 4, 2024
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  4. update TODO

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    delphinepilon committed Aug 4, 2024
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Commits on Aug 5, 2024

  1. #3 : fix bug

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    delphinepilon committed Aug 5, 2024
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  2. update TODO

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    delphinepilon committed Aug 5, 2024
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  3. #3 : configure checkboxes

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    delphinepilon committed Aug 5, 2024
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  4. #3 : fix edge case when list of labels is empty, or list of checkboxe… 

    …s is empty
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  5. update todo

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    delphinepilon committed Aug 5, 2024
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  6. #3 : add configuration of comboboxes

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    delphinepilon committed Aug 5, 2024
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  7. #3 : edit GUI for configure comboboxes

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    delphinepilon committed Aug 5, 2024
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  8. #3 : add configuration of free text boxes for classification

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    delphinepilon committed Aug 5, 2024
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Commits on Aug 6, 2024

  1. update TODO

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    delphinepilon committed Aug 6, 2024
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  2. update TODO

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    delphinepilon committed Aug 6, 2024
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  3. #3 : add option to remove mouse shortcuts (#46)

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    delphinepilon committed Aug 6, 2024
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  4. #3 : add option to remove keyboard shortcuts (#45)

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    delphinepilon committed Aug 6, 2024
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Commits on Aug 8, 2024

  1. #3 #30

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    delphinepilon committed Aug 8, 2024
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  2. Merge branch 'main' into issue-3

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    delphinepilon committed Aug 8, 2024
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  3. fix bug with classification file when edit configuration : data was n… 

    …ot written in the correct column
    @delphinepilon
    delphinepilon committed Aug 8, 2024
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  4. fix bug when label list is empty and want to add new label

    @delphinepilon
    delphinepilon committed Aug 8, 2024
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Commits on Aug 9, 2024

  1. bug fix when edit configuration of labels

    @delphinepilon
    delphinepilon committed Aug 9, 2024
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Commits on Aug 11, 2024

  1. Fixes #33: add option to display timer during segmentation; fixes #49:… 

    … no crash after volume folder selection cancel
    @AcastaPaloma
    AcastaPaloma committed Aug 11, 2024
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Commits on Aug 12, 2024

  1. disable display timer option if segmentation task hasn't been selecte… 

    …d initially
    @AcastaPaloma
    AcastaPaloma committed Aug 12, 2024
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Commits on Aug 16, 2024

  1. fix bug: only integer input in window level/width fields for ct option

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    AcastaPaloma committed Aug 16, 2024
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Commits on Aug 24, 2024

  1. include labels, semi-automatic PHE tool and timer display option in c… 

    …onfigure segmentation
    @AcastaPaloma
    AcastaPaloma committed Aug 24, 2024
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  2. restrict color RGB and min/max HU values in label configuration to in… 

    …tegers
    @AcastaPaloma
    AcastaPaloma committed Aug 24, 2024
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Commits on Aug 28, 2024

  1. add background timer counter for timer not displayed option; paint an… 

    …d segmentation options now start the timer for this option
    @AcastaPaloma
    AcastaPaloma committed Aug 28, 2024
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Commits on Sep 1, 2024

  1. fix edit segmentation button not saving details

    @AcastaPaloma
    AcastaPaloma committed Sep 1, 2024
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  2. fix phe_tool configuration bug - not appearing

    @AcastaPaloma
    AcastaPaloma committed Sep 1, 2024
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  3. separate extension code into different files for readability

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    AcastaPaloma committed Sep 1, 2024
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Commits on Sep 3, 2024

  1. add detect application style (dark/light) to change button colors in … 

    …the future for visibility
    @AcastaPaloma
    AcastaPaloma committed Sep 3, 2024
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Commits on Sep 4, 2024

  1. fix a bug where the configuration window would not load because Slice… 

    …r treats it as scriptable loadable module
    @AcastaPaloma
    AcastaPaloma committed Sep 4, 2024
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Commits on Sep 22, 2024

  1. add measurement qpushbutton - all line measurements saved in .csv fil… 

    …e - coordinates of control points and lengths
    @AcastaPaloma
    AcastaPaloma committed Sep 22, 2024
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Commits on Sep 23, 2024

  1. fusion of undo button for segment edition and markups

    @AcastaPaloma
    AcastaPaloma committed Sep 23, 2024
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  2. saves undos into csv file for removed lines

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    AcastaPaloma committed Sep 23, 2024
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Commits on Oct 23, 2024

  1. Test for revision workflow of the pull request.

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    maxradx committed Oct 23, 2024
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  2. Test for revision workflow of the pull request.

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    maxradx committed Oct 23, 2024
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Commits on Oct 24, 2024

  1. remove of test revision line for pull request.

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    maxradx committed Oct 24, 2024
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