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disabled crop for "flash filet" :)
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splis committed Mar 30, 2024
1 parent c2734a4 commit 778c965
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions js/brainchop/mainParameters.js
Original file line number Diff line number Diff line change
Expand Up @@ -113,9 +113,9 @@
isBatchOverlapEnable: false, //create extra overlap batches for inference
numOverlapBatches: 0, //Number of extra overlap batches for inference
enableTranspose : true, // Keras and tfjs input orientation may need a tranposing step to be matched
enableCrop: true, // For speed-up inference, crop brain from background before feeding to inference model to lower memory use.
cropPadding: 2, // Padding size add to cropped brain
autoThreshold: 0.1, // Threshold between 0 and 1, given no preModel and tensor is normalized either min-max or by quantiles. Will remove noisy voxels around brain
enableCrop: false, // For speed-up inference, crop brain from background before feeding to inference model to lower memory use.
cropPadding: 0, // Padding size add to cropped brain
autoThreshold: 0, // Threshold between 0 and 1, given no preModel and tensor is normalized either min-max or by quantiles. Will remove noisy voxels around brain
enableQuantileNorm: false, // Some models needs Quantile Normaliztion.
filterOutWithPreMask: false, // Can be used to multiply final output with premodel output mask to crean noisy areas
enableSeqConv: false, // For low memory system and low configuration, enable sequential convolution instead of last layer
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