v0.1.10

• ctd_DescartesHuman.rds: Cell Type Dataset generated from the Descartes Human scRNA-seq atlas.
• ctd_DescartesHuman_example.rds: Cell Type Dataset generated from the Descartes Human scRNA-seq atlas, reduced to only one cell type annotation level for fast downloading in examples.
• ctd_HumanCellLandscape.rds: Cell Type Dataset generated from the Human Cell Landscape.
• monarch_kg_cells.csv: Ground-truth phenotype-cell type associations extracted from the Monarch Knowledge Graph.
• phenomix_results.tsv.gz: Merged phenotype-cell type association results generated with MSTExplorer::run_phenomix using both the Descartes Human and the Human Cell Landscape CTDs .
• rare_disease_min_genes4_DescartesHuman.rds: Phenotype-cell type association results generated with MSTExplorer::run_phenomix using the Descartes Human CTD.
• rare_disease_min_genes4_HumanCellLandscape.rds: Phenotype-cell type association results generated with MSTExplorer::run_phenomix using the Descartes Human CTD.
• hpo_matrix.rds: Gene x phenotype association matrix generated with HPOExplorer::hpo_to_matrix. The matrix is filled with aggregated strength of evidence scores from GenCC.

v0.0.1

Data release