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Package: ConsensusPeak | ||
Title: Call consensus peaks from multiple biological replicates | ||
Version: 0.0.0.9001 | ||
Version: 0.0.0.9100 | ||
Authors@R: | ||
person(given = "Thomas", family = "Roberts", | ||
email = "[email protected]", | ||
role = c("aut", "cre"), | ||
comment = c(ORCID = "0009-0006-6244-8670")) | ||
Description: Generate consensus peak sets from multiple biological replicates. | ||
If the data are transcription factors, then Irreproducible Discovery Rate | ||
(IDR) thresholding is used to call peaks. Alternatively, if the data are | ||
histones, then consensus peaks are simply those that overlap across | ||
replicates. | ||
Methods for consensus thresholding include IDR, MSPC and ChIP-R. | ||
URL: https://github.com/neurogenomics/ConsensusPeak | ||
License: GPL (>= 3) | ||
Encoding: UTF-8 | ||
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