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Tomrrr1 committed Mar 1, 2024
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7 changes: 2 additions & 5 deletions DESCRIPTION
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Package: ConsensusPeak
Title: Call consensus peaks from multiple biological replicates
Version: 0.0.0.9001
Version: 0.0.0.9100
Authors@R:
person(given = "Thomas", family = "Roberts",
email = "[email protected]",
role = c("aut", "cre"),
comment = c(ORCID = "0009-0006-6244-8670"))
Description: Generate consensus peak sets from multiple biological replicates.
If the data are transcription factors, then Irreproducible Discovery Rate
(IDR) thresholding is used to call peaks. Alternatively, if the data are
histones, then consensus peaks are simply those that overlap across
replicates.
Methods for consensus thresholding include IDR, MSPC and ChIP-R.
URL: https://github.com/neurogenomics/ConsensusPeak
License: GPL (>= 3)
Encoding: UTF-8
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38 changes: 0 additions & 38 deletions R/prepare.R

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