Use the conda installation command from MACSr.

neurogenomics · Feb 29, 2024 · de0cd47 · de0cd47
1 parent 42fa91b
commit de0cd47
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/.github/workflows/rworkflows.yml b/.github/workflows/rworkflows.yml
@@ -40,10 +40,10 @@ jobs:
     - name: Install Conda (macOS)
       if: ${{ matrix.config.os == 'macOS-latest' }}
       run: |
-        wget https://repo.anaconda.com/miniconda/Miniconda3-py39_4.12.0-MacOSX-x86_64.sh -O miniconda.sh
-        bash miniconda.sh -b -p $HOME/miniconda
-        echo "export PATH=$HOME/miniconda/bin:$PATH" >> $GITHUB_ENV
-        echo "BASILISK_CONDA=$HOME/miniconda" >> $GITHUB_ENV
+        wget --quiet https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh -O ~/miniconda.sh && \
+        /bin/bash ~/miniconda.sh -b -p /opt/conda && \
+        rm ~/miniconda.sh && \
+        ln -s /opt/conda/bin/conda /usr/local/bin/
     - uses: neurogenomics/rworkflows@master
       with:
         run_bioccheck: ${{ false }}