Tool version compatibility test #155
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| name: Tool version compatibility test | |
| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: '21 5,17 * * *' | |
| jobs: | |
| latest: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Rename files | |
| working-directory: . | |
| run: | | |
| cp template.env .env | |
| cp local_nb_nodes.template.json local_nb_nodes.json | |
| - name: Edit NB_API_QUERY_URL env var | |
| working-directory: . | |
| run: | | |
| sed -i 's|^NB_API_QUERY_URL=.*|NB_API_QUERY_URL=http://localhost:8080|g' .env | |
| - name: Run docker compose | |
| working-directory: . | |
| run: | | |
| docker compose --profile full_stack up -d | |
| - name: Set up node env | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: 20 | |
| - name: Install cypress | |
| run: npm install | |
| - name: wait for graph set up | |
| working-directory: ./scripts | |
| run: | | |
| # The logs are written at the end of the setup at the moment, so we have to wait for the file to exist | |
| while [ ! -f ./logs/DEPLOY.log ]; do | |
| : | |
| done | |
| # Once the file is there, we want to wait for the message that the setup is done | |
| echo "We think the file exists now!" | |
| while ! tail -n 0 -f ./logs/DEPLOY.log | grep -q "Finished setting up the Neurobagel graph backend."; do | |
| : | |
| done | |
| echo "Finished setting up the Neurobagel graph backend." | |
| - name: Run end to end tests | |
| uses: cypress-io/github-action@v6 | |
| with: | |
| wait-on: http://localhost:3000 | |
| component: false | |
| - name: Latest failed, tell someone | |
| if: ${{ failure() }} | |
| run: | | |
| curl -X POST -H 'Content-type: application/json' --data '{"text":"Neurobagel latest version compatibility test failed! Please check https://github.com/neurobagel/recipes/actions and resolve the incompatible versions!"}' ${{ secrets.NB_SLACK_WEBHOOK }} | |
| - name: Clean up again | |
| working-directory: . | |
| run: | | |
| docker compose --profile full_stack down | |
| nightly: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Rename files | |
| working-directory: . | |
| run: | | |
| cp template.env .env | |
| cp local_nb_nodes.template.json local_nb_nodes.json | |
| sed -i 's/latest/nightly/g' .env | |
| - name: Edit NB_API_QUERY_URL env var | |
| working-directory: . | |
| run: | | |
| sed -i 's|^NB_API_QUERY_URL=.*|NB_API_QUERY_URL=http://localhost:8080|g' .env | |
| - name: Run docker compose | |
| working-directory: . | |
| run: | | |
| docker compose --profile full_stack up -d | |
| - name: Set up node env | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: 20 | |
| - name: Install cypress | |
| run: npm install | |
| - name: wait for graph set up | |
| working-directory: ./scripts | |
| run: | | |
| # The logs are written at the end of the setup at the moment, so we have to wait for the file to exist | |
| while [ ! -f ./logs/DEPLOY.log ]; do | |
| : | |
| done | |
| # Once the file is there, we want to wait for the message that the setup is done | |
| echo "We think the file exists now!" | |
| while ! tail -n 0 -f ./logs/DEPLOY.log | grep -q "Finished setting up the Neurobagel graph backend."; do | |
| : | |
| done | |
| echo "Finished setting up the Neurobagel graph backend." | |
| - name: Run end to end tests | |
| uses: cypress-io/github-action@v6 | |
| with: | |
| wait-on: http://localhost:3000 | |
| component: false | |
| - name: Nightly failed, tell someone | |
| if: ${{ failure() }} | |
| run: | | |
| curl -X POST -H 'Content-type: application/json' --data '{"text":"Neurobagel nightly version compatibility test failed!"}' ${{ secrets.NB_SLACK_WEBHOOK }} | |
| - name: Clean up | |
| working-directory: . | |
| run: | | |
| docker compose --profile full_stack down |