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v0.1.0

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@surchs surchs released this 27 Jun 21:36
· 137 commits to main since this release
7e12f09

First release 🎉

This is the first release of the neurobagel CLI. In this release, we introduce the bagel command and two subcommands:

  • bagel pheno for reading and processing a BIDS compatible participants.tsv file and a Neurobagel augmented participants.json data dictionary. The pheno subcommand will create a Neurobagel graph instance in the form of a .jsonld file that describes the phenotypic information in a machine readable form
  • bagel bids for reading the .jsonld file created by bagel pheno and a BIDS dataset with imaging data. This subcommand adds the imaging metadata from the BIDS dataset to the existing phenotypic descriptions, and creates an augmented .jsonld graph file that can be uploaded to the Neurobagel graph.

New Contributors

Full Changelog: https://github.com/neurobagel/bagel-cli/commits/v0.1.0