regenerate default query file

neurobagel · Oct 17, 2024 · 8387faa · 8387faa
1 parent d210fa1
commit 8387faa
Showing 1 changed file with 4 additions and 1 deletion.
diff --git a/docs/default_neurobagel_query.rq b/docs/default_neurobagel_query.rq
@@ -4,9 +4,11 @@ PREFIX nbg: <http://neurobagel.org/graph/>
 PREFIX ncit: <http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#>
 PREFIX nidm: <http://purl.org/nidash/nidm#>
 PREFIX snomed: <http://purl.bioontology.org/ontology/SNOMEDCT/>
+PREFIX np: <https://github.com/nipoppy/pipeline-catalog/tree/main/processing/>
 
 SELECT DISTINCT ?dataset_uuid ?dataset_name ?dataset_portal_uri ?sub_id ?age ?sex
-?diagnosis ?subject_group ?num_matching_phenotypic_sessions ?num_matching_imaging_sessions ?session_id ?session_type ?assessment ?image_modal ?session_file_path ?pipeline_name ?pipeline_version
+?diagnosis ?subject_group ?num_matching_phenotypic_sessions ?num_matching_imaging_sessions
+?session_id ?session_type ?assessment ?image_modal ?session_file_path ?pipeline_name ?pipeline_version
 WHERE {
     ?dataset_uuid a nb:Dataset;
         nb:hasLabel ?dataset_name;
@@ -41,6 +43,7 @@ WHERE {
 
         } GROUP BY ?subject
     }
+
     OPTIONAL {
         ?session nb:hasCompletedPipeline ?pipeline.
         ?pipeline nb:hasPipelineVersion ?pipeline_version.