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Add Docker image info to README
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adamjtaylor committed Oct 10, 2023
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Expand Up @@ -40,3 +40,10 @@ By default this outputs into a new directory called `outputs` in your current wo

- `outdir`: Directory for outputs (default: "`outputs`")
- `suffix`: Suffix for output files (default: "`_htan`")

### Docker images

This workflow uses two existing Docker images that support other HTAN pipelines

- [nf-artist](https://github.com/Sage-Bionetworks-Workflows/nf-artist/pkgs/container/nf-artist): This image is used for the conversion step
- [nf-imagecleaner](https://github.com/ncihtan/nf-imagecleaner/pkgs/container/nf-imagecleaner/115612162?tag=latest): This image is used for the deidentification steps

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