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CategoricalArray fixes #46

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CategoricalArray fixes #46

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10be227
CategoricalArray fixes
nalimilan Feb 18, 2020
f47a999
Revert unwrapping of categorical values
nalimilan Feb 19, 2020
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9 changes: 8 additions & 1 deletion src/freqtable.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -146,7 +146,14 @@ function _freqtable(x::NTuple{n, AbstractCategoricalVector}, skipmissing::Bool =
len = map(length, x)
miss = map(v -> eltype(v) >: Missing, x)
lev = map(x) do v
eltype(v) >: Missing && !skipmissing ? [levels(v); missing] : allowmissing(levels(v))
pool = CategoricalArrays.pool(v)
invorder = invperm(CategoricalArrays.order(pool))
l = [pool[i] for i in invorder]
if eltype(v) >: Missing
skipmissing ? allowmissing(l) : [l; missing]
else
l
end
end
dims = map(length, lev)
# First entry is for missing values (only correct and used if present)
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77 changes: 77 additions & 0 deletions test/freqtable.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -8,16 +8,20 @@ y = repeat(["D", "C", "A", "B"], inner=[10], outer=[10]);
tab = @inferred freqtable(x)
@test tab == [100, 100, 100, 100]
@test names(tab) == [["a", "b", "c", "d"]]
@test names(tab, 1) isa typeof(x)
@test @inferred prop(tab) == [0.25, 0.25, 0.25, 0.25]
tab = @inferred freqtable(y)
@test tab == [100, 100, 100, 100]
@test names(tab) == [["A", "B", "C", "D"]]
@test names(tab, 1) isa typeof(y)
tab = @inferred freqtable(x, y)
@test tab == [30 20 20 30;
30 20 20 30;
20 30 30 20;
20 30 30 20]
@test names(tab) == [["a", "b", "c", "d"], ["A", "B", "C", "D"]]
@test names(tab, 1) isa typeof(x)
@test names(tab, 2) isa typeof(y)

pt = @inferred prop(tab)
@test pt == [0.075 0.05 0.05 0.075;
Expand Down Expand Up @@ -77,15 +81,35 @@ cy = CategoricalArray(y)
tab = @inferred freqtable(cx)
@test tab == [100, 100, 100, 100]
@test names(tab) == [["a", "b", "c", "d"]]
@test names(tab, 1) isa Array{eltype(cx)}
@test_broken names(tab, 1) isa typeof(cx)
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This will be fixed by JuliaData/CategoricalArrays.jl#252. In practice it shouldn't make a big difference anyway.

tab = @inferred freqtable(cy)
@test tab == [100, 100, 100, 100]
@test names(tab) == [["A", "B", "C", "D"]]
@test names(tab, 1) isa Array{eltype(cy)}
@test_broken names(tab, 1) isa typeof(cy)
tab = @inferred freqtable(cx, cy)
@test tab == [30 20 20 30;
30 20 20 30;
20 30 30 20;
20 30 30 20]
@test names(tab) == [["a", "b", "c", "d"], ["A", "B", "C", "D"]]
@test names(tab, 1) isa Array{eltype(cx)}
@test names(tab, 2) isa Array{eltype(cy)}
@test_broken names(tab, 1) isa typeof(cx)
@test_broken names(tab, 2) isa typeof(cy)
tab2 = @inferred freqtable(cx, y)
@test tab2 == tab
@test names(tab2) == names(tab)
@test names(tab, 1) isa Array{eltype(cx)}
@test_broken names(tab2, 1) isa typeof(cx)
@test names(tab2, 2) isa typeof(y)
tab2 = @inferred freqtable(x, cy)
@test tab2 == tab
@test names(tab2) == names(tab)
@test names(tab2, 1) isa typeof(x)
@test names(tab, 2) isa Array{eltype(cy)}
@test_broken names(tab2, 2) isa typeof(cy)

tab = @inferred freqtable(cx, cy,
subset=1:20,
Expand All @@ -95,6 +119,10 @@ tab = @inferred freqtable(cx, cy,
0.0 0.0 3.0 2.0
0.0 0.0 1.5 1.0]
@test names(tab) == [["a", "b", "c", "d"], ["A", "B", "C", "D"]]
@test names(tab, 1) isa Array{eltype(cx)}
@test names(tab, 2) isa Array{eltype(cy)}
@test_broken names(tab, 1) isa typeof(cx)
@test_broken names(tab, 2) isa typeof(cy)


const ≅ = isequal
Expand All @@ -110,10 +138,16 @@ tab = @inferred freqtable(mx)
tabc = @inferred freqtable(mcx)
@test tab == tabc == [99, 100, 100, 100, 1]
@test names(tab) ≅ names(tabc) ≅ [["a", "b", "c", "d", missing]]
@test names(tab, 1) isa typeof(mx)
@test names(tabc, 1) isa Array{eltype(mcx)}
@test_broken names(tabc, 1) isa typeof(mcx)
tab = @inferred freqtable(my)
tabc = @inferred freqtable(mcy)
@test tab == tabc == [100, 99, 99, 98, 4]
@test names(tab) ≅ names(tabc) ≅ [["A", "B", "C", "D", missing]]
@test names(tab, 1) isa typeof(my)
@test names(tabc, 1) isa Array{eltype(mcy)}
@test_broken names(tabc, 1) isa typeof(mcy)
tab = @inferred freqtable(mx, my)
tabc = @inferred freqtable(mcx, mcy)
@test tab == tabc == [30 20 20 29 0;
Expand All @@ -123,22 +157,65 @@ tabc = @inferred freqtable(mcx, mcy)
0 0 0 0 1]
@test names(tab) ≅ names(tabc) ≅ [["a", "b", "c", "d", missing],
["A", "B", "C", "D", missing]]
@test names(tabc, 1) isa Array{eltype(mcx)}
@test names(tabc, 2) isa Array{eltype(mcy)}
@test_broken names(tabc, 1) isa typeof(mcx)
@test_broken names(tabc, 2) isa typeof(mcy)
tab = @inferred freqtable(mx, my)
tab2 = @inferred freqtable(mcx, my)
@test tab2 == tab
@test names(tab2) ≅ names(tab)
@test names(tab2, 1) isa Array{eltype(mcx)}
@test_broken names(tab2, 1) isa typeof(mcx)
@test names(tab2, 2) isa typeof(my)
tab2 = @inferred freqtable(mx, mcy)
@test tab2 == tab
@test names(tab2) ≅ names(tab)
@test names(tab2, 1) isa typeof(mx)
@test names(tab2, 2) isa Array{eltype(mcy)}
@test_broken names(tab2, 2) isa typeof(mcy)


tab = @inferred freqtable(mx, skipmissing=true)
tabc = @inferred freqtable(mcx, skipmissing=true)
@test tab == tabc == [99, 100, 100, 100]
@test names(tab) ≅ names(tabc) ≅ [["a", "b", "c", "d"]]
@test names(tab, 1) isa typeof(mx)
@test names(tabc, 1) isa Array{eltype(mcx)}
@test_broken names(tabc, 1) isa typeof(mcx)
tab = @inferred freqtable(my, skipmissing=true)
tabc = @inferred freqtable(mcy, skipmissing=true)
@test names(tab) ≅ names(tabc) ≅ [["A", "B", "C", "D"]]
@test names(tab, 1) isa typeof(my)
@test names(tabc, 1) isa Array{eltype(mcy)}
@test_broken names(tabc, 1) isa typeof(mcy)
@test tab == tabc == [100, 99, 99, 98]
tab = @inferred freqtable(mx, my, skipmissing=true)
tabc = @inferred freqtable(mcx, mcy, skipmissing=true)
@test tab == tabc == [30 20 20 29;
30 20 20 29;
20 30 30 20;
20 29 29 20]
@test names(tab) == names(tabc) == [["a", "b", "c", "d"],
["A", "B", "C", "D"]]
@test names(tab, 1) isa typeof(mx)
@test names(tab, 2) isa typeof(my)
@test names(tabc, 1) isa Array{eltype(mcx)}
@test names(tabc, 2) isa Array{eltype(mcy)}
@test_broken names(tabc, 1) isa typeof(mcx)
@test_broken names(tabc, 2) isa typeof(mcy)
tab2 = @inferred freqtable(mcx, my, skipmissing=true)
@test tab2 == tab
@test names(tab2) ≅ names(tab)
@test names(tab2, 1) isa Array{eltype(mcx)}
@test_broken names(tab2, 1) isa typeof(mcx)
@test names(tab2, 2) isa typeof(my)
tab2 = @inferred freqtable(mx, mcy, skipmissing=true)
@test tab2 == tab
@test names(tab2) ≅ names(tab)
@test names(tab2, 1) isa typeof(mx)
@test names(tab2, 2) isa Array{eltype(mcy)}
@test_broken names(tab2, 2) isa typeof(mcy)


using DataFrames
Expand Down