Feature: customisable basis functions #54
Workflow file for this run
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| name: unit tests | |
| on: | |
| push: | |
| branches: [master, develop] | |
| pull_request: | |
| branches: [master, develop] | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| compiler: [gfortran-9, gfortran-10, gfortran-12] | |
| coverage: [false] | |
| include: | |
| - os: ubuntu-latest | |
| compiler: gfortran-11 | |
| coverage: true | |
| env: | |
| FC: ${{ matrix.compiler }} | |
| PFUNIT_DIR: /home/runner/work/legolas/legolas/tests/pFUnit/build/installed | |
| LEGOLASDIR: /home/runner/work/legolas/legolas | |
| ARPACK_ROOT: /home/runner/work/legolas/legolas/tests/arpack-ng | |
| name: unit-tests / ${{ matrix.os }} / ${{ matrix.compiler }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.9 | |
| - name: Install cmake | |
| uses: jwlawson/[email protected] | |
| with: | |
| cmake-version: "3.24.x" | |
| - name: Install Legolas dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install ${{ matrix.compiler }} | |
| sudo apt-get install libblas-dev | |
| sudo apt-get install liblapack-dev | |
| sudo apt-get install lcov | |
| ${FC} --version | |
| cmake --version | |
| gcov --version | |
| - name: Install Python dependencies & Pylbo | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install pytest numpy matplotlib f90nml tqdm psutil pytest-mpl | |
| cd post_processing | |
| python setup.py develop | |
| - name: Cache pFUnit | |
| id: pfunit-cache | |
| uses: actions/cache@v1 | |
| with: | |
| path: tests/pFUnit/ | |
| key: ${{ runner.os }}-${{ matrix.compiler }}-pfunitv1 | |
| - name: Build pFUnit | |
| if: steps.pfunit-cache.outputs.cache-hit != 'true' | |
| run: | | |
| cd tests/ | |
| git clone https://github.com/Goddard-Fortran-Ecosystem/pFUnit.git | |
| cd pFUnit | |
| mkdir build | |
| cd build | |
| cmake .. -DSKIP_MPI=YES -DSKIP_OPENMP=YES -DSKIP_FHAMCREST=YES | |
| make -j 2 tests | |
| make -j 2 install | |
| - name: Cache ARPACK | |
| id: arpack-cache | |
| uses: actions/cache@v1 | |
| with: | |
| path: tests/arpack-ng/ | |
| key: ${{ runner.os }}-${{ matrix.compiler }}-arpackv1 | |
| - name: Build ARPACK | |
| if: steps.arpack-cache.outputs.cache-hit != 'true' | |
| run: | | |
| cd tests | |
| git clone https://github.com/opencollab/arpack-ng.git | |
| cd arpack-ng | |
| mkdir build | |
| mkdir installed | |
| cd build | |
| cmake -DEXAMPLES=OFF -DMPI=OFF -DBUILD_SHARED_LIBS=ON -DCMAKE_INSTALL_PREFIX=../installed .. | |
| make -j 2 | |
| sudo make -j 2 install | |
| - name: Compile Legolas | |
| run: | | |
| mkdir build | |
| cd build | |
| if [[ "${{ matrix.coverage }}" ]]; then | |
| cmake -DCoverage=ON .. | |
| else | |
| cmake -DDebug=ON .. | |
| fi | |
| make -j 2 | |
| - name: Run tests | |
| run: | | |
| cd $LEGOLASDIR/tests/unit_tests | |
| mkdir build | |
| cd build | |
| cmake -DCoverage=ON .. | |
| make -j 2 | |
| cd .. | |
| # ensure failures are caught, pFUnit sometimes silently fails? | |
| ./test_legolas | tee test_legolas.log | |
| if grep -q "FAILURES" test_legolas.log; then | |
| exit 1 | |
| fi | |
| - name: Generate coverage report | |
| if: ${{ matrix.coverage }} | |
| run: | | |
| mkdir coverage | |
| cd coverage | |
| lcov --capture --directory $LEGOLASDIR/build \ | |
| --output-file unit-tests-${{ matrix.compiler }}.info \ | |
| --gcov-tool /usr/bin/gcov-11 | |
| # filter out coverage files | |
| find $LEGOLASDIR/build -name '*.gc*' -delete | |
| - name: Archive failed logs | |
| uses: actions/upload-artifact@v2 | |
| if: failure() | |
| with: | |
| name: failed_logs | |
| path: tests/regression_tests/test_results | |
| - name: Upload coverage report | |
| uses: codecov/codecov-action@v1 | |
| if: ${{ matrix.coverage }} | |
| with: | |
| files: ./coverage/unit-tests-${{ matrix.compiler }}.info | |
| flags: legolas |