Add compile script and directories to include

compile-mtex

@@ -0,0 +1,5 @@
+#!/bin/bash
+# Usage: compile-mtex your-matlab-script.m
+# First you must set the environment variable MTEX_INCLUDE to point to
+# mtex-install-dir/mtex-include
+mcc -R -singleCompThread -m $1 $(cat $MTEX_INCLUDE | envsubst)

mtex-include

@@ -0,0 +1,86 @@
+-I ${MTEX_DIR}/extern/nfft
+-I ${MTEX_DIR}
+-I ${MTEX_DIR}/EBSDAnalysis
+-I ${MTEX_DIR}/EBSDAnalysis/EBSDSmoothing
+-I ${MTEX_DIR}/EBSDAnalysis/FMC
+-I ${MTEX_DIR}/ODFAnalysis
+-I ${MTEX_DIR}/ODFAnalysis/standardODFs
+-I ${MTEX_DIR}/PoleFigureAnalysis
+-I ${MTEX_DIR}/S2Fun
+-I ${MTEX_DIR}/SO3Fun
+-I ${MTEX_DIR}/TensorAnalysis
+-I ${MTEX_DIR}/compatibility
+-I ${MTEX_DIR}/doc
+-I ${MTEX_DIR}/doc/CrystalGeometry
+-I ${MTEX_DIR}/doc/CrystalOrientations
+-I ${MTEX_DIR}/doc/EBSDAnalysis
+-I ${MTEX_DIR}/doc/Elasticity
+-I ${MTEX_DIR}/doc/FunctionReference
+-I ${MTEX_DIR}/doc/FunctionReference/EBSDAnalysis
+-I ${MTEX_DIR}/doc/FunctionReference/ODFAnalysis
+-I ${MTEX_DIR}/doc/FunctionReference/PoleFigureAnalysis_index
+-I ${MTEX_DIR}/doc/FunctionReference/SphericalFunctions_index
+-I ${MTEX_DIR}/doc/FunctionReference/TensorAnalysis
+-I ${MTEX_DIR}/doc/FunctionReference/geometry
+-I ${MTEX_DIR}/doc/FunctionReference/plotting
+-I ${MTEX_DIR}/doc/FunctionReference/tools
+-I ${MTEX_DIR}/doc/GeneralConcepts
+-I ${MTEX_DIR}/doc/GrainBoundaries
+-I ${MTEX_DIR}/doc/Grains
+-I ${MTEX_DIR}/doc/Misorientations
+-I ${MTEX_DIR}/doc/ODFAnalysis
+-I ${MTEX_DIR}/doc/PhaseTransistions
+-I ${MTEX_DIR}/doc/Plasticity
+-I ${MTEX_DIR}/doc/Plotting
+-I ${MTEX_DIR}/doc/PoleFigureAnalysis
+-I ${MTEX_DIR}/doc/Rotations
+-I ${MTEX_DIR}/doc/SphericalFunctions
+-I ${MTEX_DIR}/doc/Tensors
+-I ${MTEX_DIR}/doc/Tutorials
+-I ${MTEX_DIR}/doc/Vectors
+-I ${MTEX_DIR}/doc/VectorsRotations
+-I ${MTEX_DIR}/doc/html
+-I ${MTEX_DIR}/doc/html/helpsearch-v3
+-I ${MTEX_DIR}/extern
+-I ${MTEX_DIR}/extern/HealpixLib
+-I ${MTEX_DIR}/extern/MatPlotLib
+-I ${MTEX_DIR}/extern/colornames
+-I ${MTEX_DIR}/extern/colornames/html
+-I ${MTEX_DIR}/extern/dipstat
+-I ${MTEX_DIR}/extern/export_fig
+-I ${MTEX_DIR}/extern/fcw
+-I ${MTEX_DIR}/extern/insidepoly
+-I ${MTEX_DIR}/extern/jsonlab
+-I ${MTEX_DIR}/extern/jsonlab/examples
+-I ${MTEX_DIR}/extern/libDirectional
+-I ${MTEX_DIR}/extern/stuct2xml
+-I ${MTEX_DIR}/extern/tensorLab
+-I ${MTEX_DIR}/geometry
+-I ${MTEX_DIR}/geometry/geometry_tools
+-I ${MTEX_DIR}/interfaces
+-I ${MTEX_DIR}/interfaces/description
+-I ${MTEX_DIR}/interfaces/import_wizard
+-I ${MTEX_DIR}/interfaces/tools
+-I ${MTEX_DIR}/mex
+-I ${MTEX_DIR}/obsolete
+-I ${MTEX_DIR}/obsolete/dummy
+-I ${MTEX_DIR}/plotting
+-I ${MTEX_DIR}/plotting/ODFSections
+-I ${MTEX_DIR}/plotting/colormaps
+-I ${MTEX_DIR}/plotting/directionColorKeys
+-I ${MTEX_DIR}/plotting/orientationColorKeys
+-I ${MTEX_DIR}/plotting/orientationPlot
+-I ${MTEX_DIR}/plotting/plotting_tools
+-I ${MTEX_DIR}/plotting/sphericalProjections
+-I ${MTEX_DIR}/tests
+-I ${MTEX_DIR}/tools
+-I ${MTEX_DIR}/tools/dubna_tools
+-I ${MTEX_DIR}/tools/file_tools
+-I ${MTEX_DIR}/tools/graph_tools
+-I ${MTEX_DIR}/tools/kernelFunctions
+-I ${MTEX_DIR}/tools/math_tools
+-I ${MTEX_DIR}/tools/misc_tools
+-I ${MTEX_DIR}/tools/option_tools
+-I ${MTEX_DIR}/tools/pathes
+-I ${MTEX_DIR}/tools/statistic_tools
+-a ${MTEX_DIR}/data