Added a check function for JaBbA to verify if gGnome has CPLEX added. #49
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# Workflow derived from https://github.com/r-lib/actions/tree/master/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
push: | |
branches: [master, zc_dev] | |
pull_request: | |
branches: [master, zc_dev] | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
runs-on: ubuntu-latest | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
JAB: ${{ secrets.JAB }} | |
URL: ${{ secrets.URL }} | |
R_CHECK_ARGS: "--no-build-vignettes --no-manual --as-cran --no-examples" | |
_R_CHECK_TESTS_NLINES_: 0 | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: TRUE | |
_R_CHECK_FORCE_SUGGESTS_: false | |
R_KEEP_PKG_SOURCE: yes | |
RCMDCHECK_ERROR_ON: error | |
steps: | |
- uses: actions/checkout@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: '4.0.2' | |
use-public-rspm: true | |
- name: cplex setup | |
run: | | |
set -x | |
curl -OL $URL | |
mv jabba.tar.gz.gpg?dl=0 jabba.tar.gz.gpg | |
gpg --pinentry-mode=loopback --passphrase="$JAB" --output jabba.tar.gz --decrypt jabba.tar.gz.gpg | |
mkdir $HOME/my.cplex && tar -xvzf jabba.tar.gz --directory $HOME/my.cplex/ | |
- name: set environment variables | |
run: | | |
set -x | |
echo "R_REMOTES_NO_ERRORS_FROM_WARNINGS=TRUE" >> $GITHUB_ENV | |
echo "CPLEX_DIR=$HOME/my.cplex" >> $GITHUB_ENV | |
echo "CPLEX_INCLUDE_PATH=$HOME/my.cplex/include" >> $GITHUB_ENV | |
echo "CPLEX_LIB_PATH=$HOME/my.cplex/lib" >> $GITHUB_ENV | |
echo "TMPDIR=${{ runner.temp }}" >> $GITHUB_ENV | |
- name: verify environment variables are set! | |
run: | | |
set -x | |
echo "Value of CPLEX_DIR: $CPLEX_DIR" | |
echo "Value of TMPDIR: $TMPDIR" | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
cache: true | |
cache-version: 1 | |
extra-packages: rcmdcheck | |
- uses: r-lib/actions/check-r-package@v2 | |
with: | |
error-on: '"error"' | |
- name: Show testthat output | |
if: always() | |
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
shell: bash | |
- name: Upload check results | |
if: failure() | |
uses: actions/upload-artifact@main | |
with: | |
name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
path: check | |
- name: manual debugging | |
if: failure() | |
uses: mxschmitt/action-tmate@v3 |