Update test_bam_collapsing.yaml

.github/workflows/test_bam_collapsing.yaml

@@ -16,15 +16,15 @@ jobs:
       max-parallel: 1
       matrix:
         platform: [ubuntu-latest]
-        python-version: [3.6]
+        python-version: [3.10]
     steps:
       - name: Checkout repo
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4
         with:
           ref: ${{ github.head_ref }}
           submodules: recursive
       - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
       - name : Set up NodeJS
@@ -34,20 +34,6 @@ jobs:
           [ -s "$NVM_DIR/nvm.sh" ] && \. "$NVM_DIR/nvm.sh"  # This loads nvm
           [ -s "$NVM_DIR/bash_completion" ] && \. "$NVM_DIR/bash_completion"  # This loads nvm bash_completion
           nvm install node
-      - name: Setup Docker   
-        uses: docker-practice/actions-setup-docker@master
-        with:
-          docker_channel: nightly
-        # this value please see https://github.com/AkihiroSuda/moby-snapshot/releases
-          docker_nightly_version: snapshot-20201109
-        env:
-          PLATFORM: ${{ matrix.platform }}
-      - name: Login to GitHub Container Registry
-        uses: docker/login-action@v1
-        with:
-          registry: ghcr.io
-          username: ${{ github.repository_owner }}
-          password: ${{ secrets.RS_PAT }}
       - name: Install Python dependencies
         run: |
           python -m pip install --upgrade pip