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Update README.md
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mourisl authored Mar 4, 2024
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Expand Up @@ -104,8 +104,8 @@ To build the index, first put the downloaded files in a list (this part is diffe

## build centrifuger index with 4 threads on a server with 300GB memory
./centrifuger-build -t 4 --conversion-table seqid2taxid.map \
--taxonomy-tree taxonomy/nodes.dmp --name-table taxonomy/names.dmp \
-l file.list -o refseq_abv --build-mem 240G
--taxonomy-tree taxonomy/nodes.dmp --name-table taxonomy/names.dmp \
-l file.list -o refseq_abv --build-mem 240G

After building the index, all but the refseq_abv.[1234].cfr index files may be removed.

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