fix precommit errors

docs/conf.py

@@ -16,6 +16,7 @@
 import sys
 
 import mock
+import sphinx_rtd_theme
 
 # If extensions (or modules to document with autodoc) are in another directory,
 # add these directories to sys.path here. If the directory is relative to the
@@ -205,7 +206,6 @@
 # The theme to use for HTML and HTML Help pages.  See the documentation for
 # a list of builtin themes.
 # html_theme = 'default'
-import sphinx_rtd_theme
 
 html_theme = "sphinx_rtd_theme"
 hhtml_theme_path = [sphinx_rtd_theme.get_html_theme_path()]

mbuild/__init__.py

@@ -1,3 +1,5 @@
+# ruff: noqa: F401
+# ruff: noqa: F403
 """mBuild: a hierarchical, component based molecule builder."""
 
 from mbuild.box import Box

mbuild/lib/atoms/__init__.py

@@ -1,3 +1,4 @@
+# ruff: noqa: F401
 """mBuild library of atoms."""
 
 from mbuild.lib.atoms.c3 import C3

mbuild/lib/bulk_materials/__init__.py

@@ -1,3 +1,4 @@
+# ruff: noqa: F401
 """mBuild bulk materials library."""
 
 from mbuild.lib.bulk_materials.amorphous_silica_bulk import AmorphousSilicaBulk

mbuild/lib/moieties/__init__.py

@@ -1,3 +1,4 @@
+# ruff: noqa: F401
 """mBuild library of common chemical moieties."""
 
 from mbuild.lib.moieties.ch2 import CH2

mbuild/lib/molecules/__init__.py

@@ -1,3 +1,4 @@
+# ruff: noqa: F401
 """Library of molecules for mBuild."""
 
 from mbuild.lib.molecules.ethane import Ethane

mbuild/lib/recipes/__init__.py

@@ -1,3 +1,4 @@
+# ruff: noqa: F401
 """Library of recipes for mBuild."""
 
 from mbuild.lib.recipes.alkane import Alkane

mbuild/lib/surfaces/__init__.py

@@ -1,3 +1,4 @@
+# ruff: noqa: F401
 """mBuild surface library."""
 
 from mbuild.lib.surfaces.amorphous_silica_surface import AmorphousSilicaSurface

mbuild/tests/test_pattern.py

@@ -162,16 +162,8 @@ def test_scaling(self):
 
     def test_scaling_error_string(self):
         with pytest.raises(TypeError):
-            pattern = mb.Random3DPattern(10, scale="tim")
+            mb.Random3DPattern(10, scale="tim")
 
     def test_scaling_error_dict(self):
         with pytest.raises(TypeError):
-            pattern = mb.Random3DPattern(10, scale={"name": "tim"})
-
-    def test_scaling_error_dict(self):
-        with pytest.raises(TypeError):
-            pattern = mb.Random3DPattern(10, scale={"name": "tim"})
-
-    def test_scaling_error_dict(self):
-        with pytest.raises(TypeError):
-            pattern = mb.Random3DPattern(10, scale={"name": "tim"})
+            mb.Random3DPattern(10, scale={"name": "tim"})

mbuild/tests/test_silica_surface.py

@@ -18,4 +18,4 @@ def test_create_amorphous_silica_surface(self):
 
     def test_amorphous_silica_surface_error(self):
         with pytest.raises(ValueError):
-            surface = AmorphousSilicaSurface(surface_roughness=2)
+            AmorphousSilicaSurface(surface_roughness=2)