chore: log when instrument model inference fails

mobiusklein · Aug 23, 2024 · 63bb08c · 63bb08c
1 parent 5eabab9
commit 63bb08c
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Showing 2 changed files with 3 additions and 4 deletions.
diff --git a/src/io/mzml/reader.rs b/src/io/mzml/reader.rs
@@ -1462,8 +1462,7 @@ impl<
     }
 
     pub fn get_chromatogram_by_id(&mut self, id: &str) -> Option<Chromatogram> {
-        let offset_ref = self.chromatogram_index.get(id);
-        let offset = offset_ref.expect("Failed to retrieve offset");
+        let offset = self.chromatogram_index.get(id)?;
         let start = self
             .handle
             .stream_position()
@@ -1486,8 +1485,7 @@ impl<
     }
 
     pub fn get_chromatogram_by_index(&mut self, index: usize) -> Option<Chromatogram> {
-        let offset_ref = self.chromatogram_index.get_index(index);
-        let (_key, offset) = offset_ref.expect("Failed to retrieve offset");
+        let (_key, offset) = self.chromatogram_index.get_index(index)?;
         let start = self
             .handle
             .stream_position()

diff --git a/src/io/thermo/instruments.rs b/src/io/thermo/instruments.rs
@@ -617,6 +617,7 @@ pub fn parse_instrument_model(instrument_model: &str) -> InstrumentModelType {
             return *model_enum;
         }
     }
+    log::debug!("Failed to infer instrument model from name string {instrument_model}");
     InstrumentModelType::Unknown
 }