Professor Morten Nielsen's Immunoinformatics and Machine Learning Lab at DTU Bioinformatics
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Repositories
- AbAgIoU Public
Computing the IoU metrics for evaluating the modelling accuracy of antibody-antigen complexes
mnielLab/AbAgIoU’s past year of commit activity - AbEpiTope-1.0 Public
AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg interfaces, and AbEpiTarget-1.0, optimised for selecting the antibody most likely to bind a given antigen.
mnielLab/AbEpiTope-1.0’s past year of commit activity - tcrcluster_backend Public
mnielLab/tcrcluster_backend’s past year of commit activity - ImmunoMSA Public
Repo containing code and workflows for creating MSA inputs for structural modelling (AlphaFold, Chai1, Boltz etc.)
mnielLab/ImmunoMSA’s past year of commit activity - NetTCR-struc Public
mnielLab/NetTCR-struc’s past year of commit activity - esm2_utilities Public
Installation guide with a little utilization code for protein language model ESM2
mnielLab/esm2_utilities’s past year of commit activity - 22125_algobio_nn Public
Repository for the neural networks part of (22125) Algorithms in Bioinformatics
mnielLab/22125_algobio_nn’s past year of commit activity
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